Zingiber officinale (ginger): 121976572
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Entry
121976572 CDS
T08725
Name
(RefSeq) transcription factor GAMYB-like isoform X1
KO
K09422
transcription factor MYB, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121976572
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
121976572
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
ExsA_N
Myb_Rap1
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
121976572
NCBI-ProteinID:
XP_042384717
LinkDB
All DBs
Position
1B:123055523..123060977
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AA seq
546 aa
AA seq
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MNQMQTESEETRIQEKPIDLTSIEEGSSLSSLSGGNRVLKKGPWTVPEDAILLNYVKKHG
EGNWNAVQKHTGLSRCGKSCRLRWANHLRPNLKKGSFTPEEEQLIIELHAKMGNKWARMA
ALMPGRTDNEIKNYWNTRIKRRQRAGLPLYPSNICYPVSEENQQYKNSSEYMLSDKQPND
HFQGSNFEIPDTVLNNFNATHGSLYSASSFSDVNVNSLLSQSFEPQSSTIGNSTLSYMKH
SEKLYPTIPSSISDGLSTFAYMVVEPRGKQLTSILGYPCDPDPRKKNLQHCGGAIPGSRA
LLNGVFSAPGPILGTSDLELPSFQCTETEDSCWPPCSSTLEATDVLGNSPSETISLQSDC
VSPRQSGLLEALVHEAQTISNTKKEPSIINNVDAYDLESESVNETKLESQSNPSISSLSR
SAGVFSSSTSLISCGSVDECPHSNIFSNSNNMMATKIFSSHKVQERGTSFSVDFSRPGSL
LGSVWLEYDSCRVREYSVLNDSFATLLGQDLCSNFKPVPVGTPSLTQGVGLDAYLWNKMP
HACQMP
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagatgcaaacagagagtgaggaaacaaggattcaagagaaaccgattgatttg
acatctatcgaagaaggcagcagcttgagttcactaagtggaggaaatcgtgttctgaaa
aaggggccttggacggttccagaggatgcaattttgttgaattatgttaaaaaacatggg
gaaggaaattggaatgctgttcagaagcacacaggtctctctcgatgtggcaaaagttgt
cgtctacggtgggccaatcatctcaggccaaatttaaagaaaggttcctttacaccagag
gaggaacaattgataattgaactccatgctaaaatgggaaacaaatgggctcgtatggct
gcacttatgcctggccgaactgataatgaaataaaaaactactggaatacaagaataaaa
agacgccaacgtgctggtttgcctctatacccatctaatatatgctatccagtttctgag
gaaaatcaacaatacaagaattccagtgaatatatgttaagtgacaaacagcccaatgat
cactttcaaggaagcaattttgaaattcctgatactgtactgaacaacttcaatgctacc
catgggtctctatatagtgcttcatcattctcagatgtaaatgttaatagcctactcagt
cagagttttgaaccccagagcagtaccatcgggaattcaacattgagttatatgaagcac
tctgaaaagctataccctactatccctagtagcatctctgatggactttctacttttgca
tatatggtcgtagagcctaggggaaaacaactgacttctatattaggttatccgtgtgat
cctgatcccagaaagaagaacctacaacattgtggaggagcaatccctggtagccgtgcc
cttctaaatggtgtattttctgctcctggtcctattcttgggacttcggatttggagctc
ccttcattccaatgtacagaaactgaggatagttgctggcctccatgttcatccactctt
gaagcaactgatgtgttgggtaactctccctcagaaactatttcattgcaatctgactgt
gtttcaccaaggcaaagtggtctactggaagcattggtacatgaagcacaaacaataagt
aacacgaagaaagaaccatctatcataaacaatgtggatgcatatgatctagagtcagaa
agtgtcaatgaaacaaagttggaaagccaaagtaacccctctatttcttctctgagtcga
tctgctggtgtcttcagttcaagcacctccctgatcagctgcggctctgtagatgagtgt
ccacattctaacatcttttcaaattctaacaacatgatggcaaccaaaattttttctagt
cataaagttcaggagagaggcacttcattctctgtagatttctcgaggccaggttcttta
ctcggttcagtttggcttgaatatgattcttgtcgtgtcagagagtactctgtcctgaat
gactcctttgcaacattgttaggccaagatttgtgcagcaacttcaaacctgtacctgtt
ggaacaccttctctaacgcagggagttggactcgacgcgtacctgtggaataaaatgcct
catgcatgtcaaatgccttga
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