Zingiber officinale (ginger): 121976622
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Entry
121976622 CDS
T08725
Name
(RefSeq) SET and MYND domain-containing protein 4-like isoform X1
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zof04990
]
121976622
Domain-containing proteins not elsewhere classified [BR:
zof04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
121976622
BRITE hierarchy
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GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_11
TPR_8
TPR_14
TPR_NPHP3
TPR_9
SET
TPR_17
DUF2616
Motif
Other DBs
NCBI-GeneID:
121976622
NCBI-ProteinID:
XP_042384803
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All DBs
Position
4B:complement(128046035..128053557)
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AA seq
797 aa
AA seq
DB search
MERLKSLIPDDLKRMIGESTPENLTISSSLILDFLRSSPQFQQVIRELTDPELALCRKNK
EAALDSKQKGNECFTEGQYAKALTFYSQALRYAPASSSEMDANLVATLYVNRASAMHNLG
LLKECVRDCNRAIAIFPTYVKAWYRRGKANASLKNYEYAKHDLEVASSLEENLFRKNQIQ
GELGIVLKESDKLNVTAMANNGGKNENVDSSAQLQSLSLQCVSTPDKGRGLTFGNDIPPA
SLVHHEQPLAAILLKAYRETRCHFCFEGVPTDLLFCPSCTIPVYCSNCCLEQAVGEESSS
KVDNHYPKKNVYVNLEKSMDRFSSDARSIRVNMPNNHIPEHRHECGGLHWSAVLPPDIVL
AARIIAISVEKWKAFGRNSSPLDYLDFVHHYAQNSIITKLESHVYAVVLLHCLHHFYNSD
FPFSAASVAQLVLVISQVKVNSMAVVHMRSLCGDEALGKFTNASTSKNYITQSTEQVRVA
QAIYTKGSLFNHSCQPNSHAYFISRTLFVHSIELVPAWSPLELSYGPQVGQLDLQDRQKL
LEEQYSFQCQCFSCSTVSLSDLVINAFRCIQPHCLGVVLEAAYDKLLEDKSLQVSNGLCN
FKISLRLPSHEKEVYSVARMLLRERGTKSHIAVGRCLSCGSYRNLKDLSAASKSYAAKIQ
RLKDSLDSDEVPDSFVPDMLNSLVQLRSVRHPYSKIVAEAEDNVAEAFVRIGEFKLAEEH
CIASIKILEKLYPPNHVVMGHELMKLASVQLCSDDYSGASISVEQVEAILSLHYGCHLDR
IFPHLKLLKREAERSAS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctgaaatccctaatcccggatgacttgaagcggatgatcggcgagagcacg
ccggagaatttgacgatctcttcttctctgattcttgactttttacgctcctcgcctcag
tttcagcaagttattagggaattgacagatcctgaactggcactctgtcggaagaacaag
gaagctgctttggattcgaagcagaaaggaaacgagtgttttaccgagggacaatacgct
aaagctttgaccttttactcgcaggcattgcgttatgcccctgcaagttcctctgagatg
gatgcaaatttggttgccactttatatgtaaacagggcttctgctatgcataatctaggc
cttctaaaagagtgcgttcgagattgcaaccgagccattgcgattttccctacttatgtc
aaggcatggtacagaagagggaaggcaaatgcttctttaaaaaattatgaatatgccaaa
catgacctagaagttgcttccagtttggaagagaacttgtttaggaagaaccaaattcaa
ggcgagctgggtattgtgttaaaagaatctgataagttaaatgtgactgcaatggcaaac
aatggtggaaaaaatgagaatgtagactcctcagctcagttacaatctctatcacttcaa
tgtgtatcaacaccagataaaggaagaggactaacttttggaaatgacattcctccagct
tccttagttcatcatgaacaacctcttgctgcgattttacttaaggcttaccgtgaaact
cgctgccacttttgcttcgaaggagtaccaactgatctcttgttctgcccttcttgtacc
ataccagtgtactgctctaattgttgtttggaacaagctgttggagaagaatcatcaagt
aaagtcgacaatcattatccaaagaaaaatgtgtatgtaaatcttgagaaatctatggat
agattttcaagtgatgccagaagtatcagagtcaacatgcccaataatcacattccagaa
catcgtcatgaatgtggtggtctgcactggtctgctgtattgccacctgacatagtttta
gctgcccgaataattgcaatttctgtcgaaaaatggaaggcttttgggaggaactctagt
cccttggattatttggattttgtccaccattatgctcaaaattctataattactaagttg
gagtcgcatgtctatgcagttgtcttgttgcactgtttgcatcatttctataattcagat
ttcccattcagtgcggcttctgttgcccagttggttctggtgatatcccaggttaaggtc
aattcgatggcggttgtccatatgagatcgttatgtggagatgaggctttagggaagttt
acaaatgcttcaacctccaaaaattatattactcaaagtactgaacaggttagagtagcg
caagctatatatacaaagggcagcttgtttaaccactcgtgccagcctaattctcatgct
tattttatttcccgtacgctctttgtacattctatagaacttgtaccagcatggagtcca
cttgagctgtcttatggtcctcaggtgggacagttagatcttcaagataggcagaagttg
ctcgaggagcagtactccttccaatgccaatgctttagttgttccacagtgagcctttca
gatcttgttattaatgctttcagatgtattcagcctcattgtctcggtgtggtcctagaa
gctgcttatgacaaactgctcgaggacaagtccttgcaagtttctaatggactttgcaat
tttaaaatttctttacgtttgccgagccatgaaaaagaagtatatagtgttgcaagaatg
ttgcttcgtgaaagaggtaccaagagtcacattgctgttggccggtgtttgagttgcggt
tcctatcgaaatttgaaggatttatctgcagcatctaaaagctatgcagcaaaaattcag
aggttaaaggattctttggattcagacgaagttcctgattcttttgttccagatatgctg
aattctcttgttcagctcagatcagtaaggcatccatatagtaagattgtcgctgaggct
gaggataatgttgcagaggcatttgttagaatcggagaattcaaactggcagaagaacac
tgtatcgcttccattaagatcctcgagaagctttaccctccgaatcacgtcgtcatggga
cacgagctaatgaagttggcctccgttcaactctgctccgatgattactctggtgcatca
atcagcgttgaacaagtagaagccattctctcgcttcattacggatgtcatttggatcgt
atatttccacacctgaagctcctcaagagagaggctgagagatctgcttcttag
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