Zingiber officinale (ginger): 121976646
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Entry
121976646 CDS
T08725
Name
(RefSeq) KH domain-containing protein HEN4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121976646
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121976646
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
121976646
NCBI-ProteinID:
XP_042384837
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Position
4B:complement(128457030..128463952)
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AA seq
660 aa
AA seq
DB search
MDEKRYAKQTSGNFRKRPRDQFDNGKRKKHNPNRDHGSTNKPIDTIYRILCPVKKIGSVL
GRGGDIVNALRDETHAKIRVADAITGAEERVIIIFNYPSQSEENNPGQDTENSDKNELED
MLPHCPAQDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNI
IQQLRTNTGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENP
SLEDIIYASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSG
SFSRNSFQEGEMAEEFSMRILCATVKIGGVIGKGGTNIRQLEQQTGARIQVEDTAPDAEE
RVINISCKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSKVGCILGQGGDVI
TEMRRRTRADIRVYSKDDKPKYTSANEELVQISGPRDFAWDALVEIASRLRARTFRSGNS
SANPAPAGPFRGVPPFERIPHRGAPSAGNADLGSARPGHFRGYITERHPDRGISSSSMFE
SEKSVGYDYRKAYGQSYEAPYYHSPAAAGYTNYNAPAEPKIPYGGAPSVGRADISNFDIR
QAPGARVKSHNPMLGVPEHVMDVHGPSEYSRPGQGGHLPPPYMSSGSQGILPSQQSIRPY
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaagaggtatgcaaaacaaacatcaggaaatttcaggaaacggccccgtgat
caatttgataatgggaaacgaaagaaacacaatcctaaccgtgatcatggttctactaat
aaacctattgatacaatttaccgcatcctttgccctgttaaaaagattggtagtgttctg
ggtagaggaggtgatattgttaacgcccttagagatgagacccatgcaaaaataagggtt
gcagatgctattaccggtgcagaggagagagtaattattatttttaattacccatcccaa
tctgaagaaaacaatcctggtcaggatactgaaaatagtgataaaaatgagctagaggac
atgctaccccactgtcctgcccaggatgctttactcaagattcatgacaggattgctgca
gatgagattttacgtggtggtgtcgtgcaagagagaactgaatctgatgatattgttact
gctcgaattttggtcccaaaaaatcaagttggatgccttcttggcaagggtggaaatatt
attcagcaactgcgaacaaatactggtgcaaatattcgcatattgcctcctgatcacctt
cctccatgtgccatgggcagcgatgagctagtacaggtatcaggagtgccatctattgca
aagaaggctctatacagaatatcagctttgctgcatcagcatcctaataaagaaaatccg
tctttggaagatatcatatatgccagtacccgaggttcttatcgttcagattcatctatc
ccagctccattgcctcagggaaatcgagtgtggtctccgtattactctgatgtccgtgac
ccatcaacagtctcaagattcaacaggtatccagatgagccatcgagatatccttctggt
agttttagcagaaacagtttccaggagggtgaaatggcagaagaattttccatgagaatt
ttgtgtgctactgtgaagattggcggagtgattggcaagggtgggaccaatatcagacaa
ttagagcaacaaacaggtgctcgtattcaggttgaggatactgcacctgatgctgaagaa
cgtgtgatcaatatttcatgcaaggaggttccatgggagacaagatctcctacaatcgaa
gctgctcttcagattcaaaataagacaagttcgaactctgatgatgatgctatcacaaca
cggcttcttgtcccatcaagtaaagtcggttgcatacttggacaaggaggtgacgtcata
acagaaatgagaagacgaactagagcagatattcgtgtttattccaaggatgacaagcca
aaatatacatccgcaaatgaagaactagtacagatttctggacctagagattttgcttgg
gatgcacttgtggagattgcttcaaggcttagagcaagaacttttcgaagtgggaattct
tctgctaaccctgcacctgcaggcccttttcgtggggttcctccttttgaaagaattcct
catcgaggtgcaccatcagctggaaatgcagatttgggttctgcacgacctggtcatttt
cgtggttatattactgaaagacatcctgatagaggaatttcatcatctagcatgtttgaa
tctgagaaatctgttgggtatgattaccggaaggcttacggacaatcatatgaagctcca
tactaccattcaccagctgctgctgggtacactaattacaatgcccctgctgaacctaag
attccttatggtggggccccttcagttggcagagctgatataagcaattttgatattcgt
caggcccctggagcgagagtcaaatcgcacaatcctatgttgggtgttccggagcatgtc
atggacgtgcacggtccttcagaatattcaaggccaggacagggcggccatcttccacca
ccctatatgtcttccggaagccagggcatactgccatctcaacaatcaattcgcccgtac
tag
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