Zingiber officinale (ginger): 121976660
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Entry
121976660 CDS
T08725
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4-like
KO
K11842
ubiquitin carboxyl-terminal hydrolase 12/46 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
121976660
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121976660
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121976660
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121976660
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121976660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
121976660
NCBI-ProteinID:
XP_042384862
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All DBs
Position
4B:complement(128995573..129000807)
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AA seq
367 aa
AA seq
DB search
MGATGSKLEKALGEQFPEGERYYGLENFGNTCYCNSVLQALFFCAPFREQLLEYHEKNKN
NGDAEENLLTCLADLFSQISSQKKKTGVVSPRRFVQRVKKQNELFRSYMHQDAHEFLNFL
LNELVDILEKEANTPKSSSEASSMPQKLANGQTNLHVNGVTKESLVPWVHKSFQGTLTNE
TKCLLCETVTARDEPFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ
KRMKIKKPPNILVIHLKRFKYIEQLGRYKKLLYRVVFPLELKLNNTVENSDTEYALFAVV
VHVGVGPNHGHYVSLVKSHNHWLYFDDENVEMIDESTVQTYFGSAQEYTGNTDHGYILFY
ESLNSKR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgacgggatcgaagcttgagaaggctctcggcgagcagttcccggaaggtgag
cggtactatggccttgagaactttggcaacacctgctactgcaacagcgtcttgcaggct
ctttttttctgtgcccctttccgggagcaattgctggagtatcatgaaaagaataaaaat
aatggtgatgcagaggagaatcttttgacatgtcttgctgacctattttctcagatcagt
tctcagaagaagaaaactggtgttgtctctcctaggcgctttgtacaaagggtgaagaaa
caaaatgagttgttccgtagttacatgcaccaggatgctcatgagtttttgaatttcctg
ctcaacgagcttgttgatattctagagaaagaagccaatactccaaagtcctcatccgag
gcctcatcgatgccccaaaaacttgcaaatggccaaactaatctgcatgtcaatggtgta
acaaaagagtcccttgttccttgggttcacaaaagttttcaaggcactcttaccaatgaa
acaaaatgtttgctttgtgaaactgttactgctagagatgaaccatttttggacttaagc
ctcgacattgaacaaaatagttcaatcacaagttgtctcaaaaatttcagttcaactgaa
accctcaatgcagaagataagttcttctgtgacaaatgttgcagcttgcaagaggcccaa
aaaaggatgaagatcaagaagccacctaacatcctcgtaatccatctcaagcgcttcaaa
tatatcgaacagctgggccgctacaagaagctactctaccgtgtcgtctttcccttggag
ttgaaactgaacaacaccgtcgagaattcagataccgagtatgctctctttgctgtggtg
gttcatgtgggagttggccccaaccacggacactatgttagtctcgtgaagagtcacaac
cattggctttatttcgacgatgaaaatgttgaaatgattgatgaatcgactgtccaaaca
tactttgggtcggcacaggagtacacaggtaacactgatcacgggtacattctgttctac
gagagcctcaatagcaaaagatga
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