Zingiber officinale (ginger): 121976704
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Entry
121976704 CDS
T08725
Name
(RefSeq) tryptophan synthase beta chain 2-like isoform X1
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00260
Glycine, serine and threonine metabolism
zof00400
Phenylalanine, tyrosine and tryptophan biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01230
Biosynthesis of amino acids
Module
zof_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
121976704
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
121976704
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
121976704
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Motif
Pfam:
PALP
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-GeneID:
121976704
NCBI-ProteinID:
XP_042384932
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Position
4B:complement(129707172..129709558)
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AA seq
504 aa
AA seq
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MASAAAAANRHPQGSSSTTAFCSTTAKSLLGLAPSVRFGVHEKLSHGHGLRIRATSGDSN
KVEVPRQWYNLIADLPVKPPPALHPKTHKPLKQEDLSPLFPDELIKQEVSEERFIPIPEE
VIDIYRLWRPTPLIRAKRLEKLLETPARIYYKYEGTSPAGSHKPNTAVPQAWYNAQQGVR
NVVTETGAGQWGSSLAFACSLFGLNCEVWQVRASYDQKPYRKLMMQTWGARVHPSPSTVT
NAGRKILEDDPMSPGSLGIAISEAVEVAAAHEDTKYCLGSVLNHVLLHQTIIGEECLEQL
AAIGETPDVIIGCTGGGSNFGGLTFPFIREKLKGKLNPLIRAVEPAACPSLTKGIYAYDY
GDTVGMTPLMKMHTLGHDFVPDPIHAGGLRYHGMAPLVSHVYEMGFMEAISLPQTECFRG
ALLFARTEGLIPAPEPTHAIAAAIREALHCKETGEKKVILIAMCGHGHFDLASYEKYLEG
NMVDLDFSSEKAQASLAAIPQIVP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccgcagccgccgccaaccgtcaccctcaaggatcttcctcgacaacagcg
ttttgctcaactactgcgaaatcactgcttggtttggcaccaagcgtgaggtttggagtc
catgagaagctctctcacggccatggactgagaatccgagcaacttccggcgacagcaac
aaggtggaggtaccaaggcagtggtacaacctcatcgctgatctccctgtaaaacctcct
cctgctctgcatccgaagacacacaagccactcaaacaagaagatctatcgccccttttc
ccagatgagttgatcaagcaagaggtcagcgaggagaggttcatccctataccggaggaa
gtcatcgacatctacaggctctggcggccaacccctcttatcagagccaagagactagag
aaactgcttgaaacacctgcaaggatctactataagtatgagggcacaagccctgcagga
tctcacaagcccaataccgcagtcccacaagcatggtacaatgctcagcagggagtgagg
aacgtcgtgaccgaaaccggcgcaggccagtggggcagctctttggcttttgcttgtagc
ctattcggtctcaattgtgaagtttggcaggttcgcgcttcttatgatcagaaaccttac
cggaaactcatgatgcaaacatggggagctagagttcatccgtcaccctctacggtcacc
aatgctggtcgaaaaatccttgaggatgatcctatgagccccggcagtttagggatagca
atctctgaggcagttgaggttgcagctgcccatgaggacaccaagtattgtttggggagt
gttctaaaccatgtgttgcttcaccaaactatcatcggggaggaatgtcttgagcaactg
gcggcgatcggtgaaacgccggatgtgatcataggctgcaccggcggcgggtctaacttt
ggcgggttaacgtttcctttcattcgggagaagctgaaaggaaaattgaaccccctgata
agagctgtagagccagctgcttgtccttctctgaccaaaggcatttacgcctatgattat
ggtgacaccgtcgggatgacaccattgatgaagatgcatactctcggccatgactttgtc
cctgatccaattcatgcaggtggtttgcgctaccatggaatggcaccactagtttctcat
gtttatgagatgggattcatggaagctatatcacttcctcaaactgaatgctttcgcggt
gccttgctgtttgcacgaacagagggtctaattccggctccagagccaactcacgccatt
gctgctgcaattagagaagcactgcactgtaaagagacgggcgaaaagaaagtcatactg
atagcaatgtgtgggcatggacattttgatctggcttcctatgagaagtatttggaaggc
aacatggttgatctcgacttctccagtgaaaaggcacaagcatcgttggctgccatccct
caaattgttccctga
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