Zingiber officinale (ginger): 121976806
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Entry
121976806 CDS
T08725
Name
(RefSeq) peroxisome biogenesis protein 1-like isoform X1
KO
K13338
peroxin-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121976806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121976806
Membrane trafficking [BR:
zof04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
121976806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
AAA_22
AAA_5
NPHP3_N
AAA_14
RuvB_N
NACHT
nSTAND3
AAA_18
ATPase_2
RNA_helicase
AAA_25
AAA_28
NB-ARC
IstB_IS21
AAA_19
AAA_17
Mg_chelatase
AAA_24
AAA_7
AAA_33
AAA_2
AAA_11
Bac_DnaA
AAA_29
ORC-CDC6-like
DUF815
ABC_tran
NTPase_1
AAA_30
TsaE
Zeta_toxin
PhoH
AAA_23
TIP49
AAA_lid_PRS2_C
KTI12
Viral_helicase1
FtsK_SpoIIIE
Sigma54_activat
ATP_bind_1
ResIII
KAP_NTPase
UvrD-helicase
cobW
Motif
Other DBs
NCBI-GeneID:
121976806
NCBI-ProteinID:
XP_042385097
LinkDB
All DBs
Position
4B:complement(132232876..132248622)
Genome browser
AA seq
1133 aa
AA seq
DB search
MEFEVRAVGGIESCFVSLPLSLIQTLENTRGGFLPPVLALQLRACSGGGCWNVGWSGSAS
KTAAIEVDQLLAECISLPDHTRVQIKAIANLPKADFVNIEPSSEDDWEILELNSELAEEA
ILKQVGVVYEGMKFPLWLHGHVMVELVVVSTSPRESVVQLVPGTEVVVEPKRRKNEVLTH
QSVQKQNSRKELRMKALLRVQAEKRKYVHKIEFKDIDVLVFLSYIAFIHPETAKKFSLEN
LQLATVIPKLWLKEISQNSNAISERRGDNHFNMQGNSGLPTTSKVKPRHAVVHIIYSDAV
AKGHVMLPQSLRHFIGSGLHSWVFIKKHFRSPKKDIFSMTASPLRFNLVGNGKVNDDKRN
TIESHTILKQEGMATDGDTSTGGILDWSLQESSFSPLTYETLLNEDSSNVGIGIKLENKL
LVKLWMIGQIGAIASQNSQMKVNSVVLTNETLLHIEIIDHKFGKKKEELSLQGTNERGNV
GNRKIEIFYLLRINYIDSSKCDVDASFEFDITAGSKNSDNLHDLELALGKLEVGEPLSFD
SISESVFKRNFHLTASSLSWLKASISDVTDRLLILLSPESMNLISAYDIPSPGHILIYGP
PGSGKTTLARAVARHFEEHEEILAHIIFISCSKLALEKSLTVQQAISEYISEALSYSPSI
VIFDDLDNIISFSSDEGSRPSSSATALVNYVIDIVDEYGNRSRSSCGYGPVAFVASVQSL
QNIPPSLSSSGRFDFHVQLVSPAVSERGQILKHEIEKRALLCPDDIVSEIASKCDGYDAY
DLEILVDRAVHAAVSRFLPSRVDKDTELVLQKEDFSQAMHEFVPIAMRGLTKAASEGGHS
GWDDVGGLADIRNAIQEMIELPSKFPGIFSQSPLRLRSNVLLYGPPGCGKTHIVGAAAAA
CSLRFISVKGPELLNKYIGASEQAVRDLFSKAAAASPCLLFFDEFDSIAPKRGHDNTGVT
DRVVNQLLTELDGVEALTGVFVFAATSRPDLLDAALLRPGRLDRLLYCDFPSWHERLDIL
KVLSKKLPLEKNIDLETVASMTEGFSGADLQALLSDAQLASVHELLDSENSDKPGKTPVI
SNQLLMSVASKARPSVSEDEKRRLSRIYNQFLELKKSVSAQTRDAKGKKATLA
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgaggtgcgggcggttggcgggattgagagctgcttcgtctcgctccctctt
tctcttatccaaactctcgagaatacgagaggcgggttccttccaccggtgctcgctctc
caactccgagcctgctctggaggaggttgttggaacgtcggatggtccggctccgcctcc
aagaccgctgcaatcgaggtcgatcaactattggctgaatgcatttctttaccggatcat
actagagtgcagatcaaagccattgctaacctaccaaaagctgactttgtcaatatagag
ccaagcagtgaggatgactgggagattttggagctaaactcagaacttgctgaagaagct
attttgaaacaagttggcgttgtctatgaagggatgaaatttcctttatggttacatggc
catgttatggtggaattagttgtggtctctacttctcctagggaatcggtagttcaactt
gtgcctggtacagaagttgttgttgaaccaaagagacggaaaaatgaagtgcttacacac
cagagtgttcaaaagcaaaattcaagaaaagaactaaggatgaaggcactcttacgtgta
caggctgaaaaaaggaaatatgtgcataaaatcgagttcaaagatattgatgttttggtg
tttctaagttatattgcatttatacatccagaaacggctaagaagttttcattagaaaat
ctacaattagcaacagttatacccaaattatggcttaaggagatttcacagaatagtaat
gctatttctgagagaagaggagataatcatttcaacatgcaaggaaatagtgggcttcct
acgactagtaaagtgaagccaagacatgctgtggtccatatcatatattctgatgcagta
gcaaaaggccatgtaatgcttcctcaatctcttcgtcatttcataggatctggtttgcat
tcatgggttttcattaaaaagcacttccgaagtccaaagaaagacattttttcaatgaca
gcttctcctcttcgatttaatttggttggaaatggtaaggttaatgatgataaaagaaat
actattgagagccacacaattctcaagcaggaggggatggcaactgatggagatacttcc
actggaggtatcttagactggtcacttcaagaatcctcattctctcctttgacctatgaa
actcttctaaatgaggattctagcaatgttggtattggtataaaattggagaataagtta
cttgtaaagttatggatgattggacaaattggggccattgcatctcaaaatagtcagatg
aaagttaactctgttgttttaacaaatgaaacattgcttcacattgaaatcatagatcat
aaatttggtaaaaagaaagaggagctatctttgcagggtactaatgagaggggaaatgtt
gggaaccgcaagattgagattttttatctactcagaatcaattatattgactcatcaaaa
tgcgatgtagatgctagctttgagtttgacatcactgctggcagcaaaaacagcgacaat
ttgcatgatttggaattggcgcttggaaaattggaagttggggaacctctatcctttgat
tctatttcagagagtgttttcaaaagaaacttccatctaactgcatcttccttaagttgg
ttgaaggcatccatttctgatgtcactgatagattgctcatccttctatctccagagtct
atgaatttgatttctgcttatgatattccatctcctgggcacatacttatttatggacct
cctgggtctgggaaaactacattagccagggctgttgctaggcattttgaagagcacgaa
gaaatcttagctcacataattttcataagctgttcaaaacttgctcttgaaaagagtctg
actgtgcaacaagcaatttctgaatatatatctgaagctctatcctattcaccatctatt
gtcatttttgacgatctagacaatatcatttcattttcttcggacgagggatctcgacca
tccagttcagctactgctttggttaactatgttattgatattgtagatgaatatgggaat
aggagccgaagttcttgtggatacggtcctgttgcttttgttgcttctgtgcagtctctc
cagaatattcccccatctttgagttcttcagggaggtttgacttccatgttcaactagtt
tctcctgctgtctctgaacgtgggcaaatattaaagcatgaaattgaaaaacgtgcttta
ctgtgtcctgatgacatagtctctgaaattgcttcaaaatgtgatggatatgatgcctat
gacttggaaattttggttgatagggctgtacatgctgctgtcagtcgttttttgccttct
agggttgataaagatacagaacttgttctgcagaaagaagacttctcgcaggcgatgcat
gagtttgttccaattgcaatgcgtggtctaacaaaagctgcttctgaaggcggacacagt
ggttgggatgatgttggtggacttgcagatatccgaaatgctattcaggagatgattgaa
ttaccttcaaagtttcctgggatattttctcaatcaccattaagattgaggtcaaatgtc
ctcttgtatgggcctcctggttgtggaaaaactcacattgtcggtgctgcagcagcagct
tgctccttgaggttcatatctgtcaagggacctgagttgctgaataagtacattggtgct
tctgagcaagctgtccgcgatctgttctccaaggcagcagctgcttctccttgtcttcta
ttttttgatgaatttgactctattgcaccaaagagggggcatgataatactggagtgaca
gatcgtgttgttaatcagttgctaactgaattggatggcgtggaagcattgacaggggtg
tttgtgtttgctgctactagtcggccagatctacttgatgctgcacttttgcgacctgga
aggcttgatcgacttctttactgtgattttccatcctggcatgagcgattggatattctt
aaggttctgtctaagaagcttcctttggaaaagaatattgatctggaaacggtagcatca
atgaccgaaggctttagtggtgcagatcttcaagcactcctgtcagatgctcagcttgca
tcagttcatgagctcctggatagtgaaaacagtgacaagcctgggaaaacacctgttatc
agtaatcagcttctgatgtctgttgcttcaaaggctcgaccttccgtatcagaagacgag
aaacgcaggctatccaggatttataatcagttcctggagttgaagaaatctgtttctgca
cagacaagggatgcaaagggcaaaaaggcaaccctagcttga
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