Zingiber officinale (ginger): 121976825
Help
Entry
121976825 CDS
T08725
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121976825
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121976825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR19_1st
MIOS_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
121976825
NCBI-ProteinID:
XP_042385126
LinkDB
All DBs
Position
4B:132572181..132575772
Genome browser
AA seq
528 aa
AA seq
DB search
MPQSSLSPSSLRLAMENRCRPSSFFGDLRSRELNGLRVRKRSHLGDLTSDASGAGAGVLA
IEHDGEPSPPTAVSFCKSSRNPHLLAVSDEEGYISFYDTRRSLPSYSSCWEGAGQARVCN
WIAHSNAIFDICWNKEDNQILTASGDQHIKIWNAEKRTCTGSLAGHTGSVKTVCSHSSNP
DLVVSGSRDGSFALWDLRCSFSSTNRFGETCLSPISLVNDAHALTQRKRGWRGKADSKSI
TSVLYLKDGISIATAGAVNSVVKFWDTRNLKTSIIQTCPAAEPSTKSEKIQHGITSLSQD
SYGVSLAASCRDNRIYLYDVLKLDRGPIKIFSGSKIGSFFVKSVISLDGAHILGGSSDDN
AYIWQVRRPESAPTILKGHQGEVTSVDWCSSELGKVVTSSDDFMVRVWKMNKDGCLNTKS
PAAIRKRIIAPSVEPRRLILDEPPTCSASMKDNFQTMEATVHEPSSPAQCKVVEFRTPES
GRKRSSSFLMDGKEMQESLEAISGSPSSVLSPPPSTKRRTILDYYHSV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaatccagtctctctccttcctctctccgtttagcaatggagaatcggtgtcgc
ccttcttccttcttcggcgatctgcgttccagagagctaaatggcctaagagttcgtaaa
aggtcgcatctcggggaccttacgtcggatgccagcggagctggcgcaggagtgctcgcc
atcgagcacgatggcgagccctcgcctcccacagccgtctccttctgcaagagtagtaga
aatccccacctccttgcggtgtctgatgaagaaggatacatcagcttctatgacacgcgc
cgcagcttgccgtcctattcatcttgctgggaaggagcaggacaagctagggtttgcaat
tggattgcacatagcaatgctatatttgacatatgctggaacaaggaagataatcagatt
ttaactgcttcaggtgatcaacatatcaagatttggaatgctgaaaagagaacatgcact
gggagcttggcagggcatacaggcagcgttaaaacagtttgctctcactcatcaaatcct
gaccttgttgtttctggatcaagagatggatcttttgctctttgggatctaagatgcagt
tttagttccacaaatcgctttggggaaacatgtttatcgcctatttcgcttgtcaatgat
gcccatgcactcacccaaagaaagaggggttggcgaggaaaggctgattctaagagcatc
acttcagttctttatctcaaagatgggatttccattgccacagctggagcagtaaacagt
gttgtgaagttctgggatacacgcaatctgaaaacatctataattcaaacttgccctgct
gctgagccatcaacaaaatcagaaaagattcaacatggaattactagcctttcgcaagat
tcctatggtgtttctcttgcagcttcctgcagggataacaggatttatctatatgatgtg
ctgaaacttgatagaggtcccataaagattttttctggaagtaaaattgggtcattcttc
gtgaagtctgttattagccttgatggtgctcacattcttgggggttccagtgacgacaat
gcttacatatggcaggtgaggagaccagaaagtgcaccaactattctgaaaggtcatcaa
ggagaagttacttctgtcgattggtgctcatccgaacttggaaaagtagtcacttcttca
gatgactttatggtgcgtgtctggaaaatgaataaggatggttgcttaaatacaaaatct
ccagcagcaattaggaagcggataattgctccttcagttgagcccagaaggctgatatta
gatgagcctcctacatgttcagcttccatgaaagataatttccaaactatggaagcaaca
gtacatgagccatcctcgcctgctcaatgcaaagttgttgaattcagaacacctgaatca
ggaagaaagagaagttcttcatttcttatggatggaaaagagatgcaggaaagtcttgaa
gctatttctggtagcccttcttctgttttgagtcctcctccctctactaaaaggagaact
atcctggactattatcattctgtttga
DBGET
integrated database retrieval system