Zingiber officinale (ginger): 121976877
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Entry
121976877 CDS
T08725
Name
(RefSeq) ABC transporter G family member 42-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121976877
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
121976877
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
121976877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
ABC2_membrane_3
AAA_16
AAA
AAA_28
AAA_25
AAA_33
RsgA_GTPase
nSTAND3
ABC_ATPase
DUF1440
PDR_CDR
Motif
Other DBs
NCBI-GeneID:
121976877
NCBI-ProteinID:
XP_042385203
LinkDB
All DBs
Position
4B:complement(134466325..134476132)
Genome browser
AA seq
1502 aa
AA seq
DB search
MEAVERVWDSGRRASQSLSHNISRGMNMGGWGVEDVFSRNSSTRRRSGSSRDDDEEALRW
AALERLPTYDRLRTAILRSAADPGGGPGEARRQYRHKEVDVRKLGPAERQEFIDRVFKVA
EEGNERFLKKLRDRIDKVGIRLPTIEVRFEHLNVKAKCHAGDRALPTLTNTVRDIAESAL
ALLGIRLTKRTTLTILKDVSGIIQPSRMTLLLGPPSSGKTTLLLALAGKLDPTLKVNGEI
TYNGHRLDEFVPQKTAAYISQNDVHLGEMTVKETLDFSARCQGVGVRYDLLSELAKREKE
AGIFPEAEVDLFMKATAIEGVESSLQTDYTLRILGLDICADTIVGDEMQRGISGGQKKRV
TTGEMMVGPTKLLFMDEISTGLDSSTTYQIVKCLQQIVHLGEATILMSLLQPAPETFDLF
DDILLLSEGQIVYQGPRDHVLDFFQSCGFRCPTRKGTADFLQEVTSRKDQEQYWADKQRP
YRYISVSEFAQRFRRFHVGLRLENELSVPFDKARSHKAALVFSKKVVSYSELLKASFGKE
WLLIKRNSFVYISKTVMIVIIGLIASTVWLRSRMHSRNEDDGVIYIGALLFGLMVNVFNG
LAELSIAIDRLPVFYKHRDLLFYPAWVFTLPNFLLRIPISILETIVWTVMTYYTIGYAPE
ASRFFKQLLLIFLIQQMAAGMFRSIAGLCRSMIIANTGGALSVLAMFVLGGFIIPKEMIP
NWWIWGYWVSPLTYGYNALAVNEFLAPRWMTQMAPNNRPLGTAILQNANVFAEGRWYWIG
AAVLFGFSIIFNVLFTVCLMFLNPIGKRQAVISEETAREMEEVQEEGKDLRRLRRTNSKS
ESIPHALSKKDGNNTSEIMMIRMSPNLSNGLNHEMSINAATGVAPKRGMILPFTPLSMSF
DEINYFVDMPPEMKEQGVTEDRLQLLRNVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRK
TGGYIEGDIRISGYPKKQETFARISGYCEQNDIHSPQVTVRESLIFSAFLRLPHEVSDEE
KMKFVDEVMDLVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL
DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSH
KIIEYFEAIPGVPKIKDKYNPATWMLEVSSVAAEVRLGMDSAQYYKSSNLFQCNKALVNE
LSKPAAETSDLYFRTQCSQSSWGQFKACLWKQWWTYWRSPDYNLVRYFYTLITALLLGSI
CWRIGHKGDNSNSLRIVIGAMYVAVMFVGVTNCATVQPLVAIERTVFYRERAAGMYSALP
YALAQVLVEIPYVLVQTMYFSLIIYSMMSFQWTAAKFLWFYFISFFSFLYFTYYGMMTVS
LSPNHQVAAILASTFYSVFNLFSGFFIPKPRIPKWWVWYYWICPLQWTVYGLIATQYGDL
ETRITVTGSVGQPRQRIKDYIKDYYGYNTGFMPVVAIVLVAFAIFFAFMFAFCIKKLNFQ
NR
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtggagcgggtgtgggattcggggcggcgggccagccagagcctgagccac
aacattagccgagggatgaacatgggcggctggggagtggaggacgtgttctcgcgcaac
agcagcactcggaggcggtccggtagcagccgcgacgacgacgaggaggccctgcgctgg
gccgccctcgagaggctgcccacctacgaccgcctccgcaccgcgatcctccggtcggcc
gccgatccgggcggcggaccgggcgaggcgcggcgccagtaccgccacaaggaggtcgac
gtgcgcaagctcggccccgccgagcgccaggagttcatcgatcgcgtcttcaaggtcgcc
gaggagggcaacgagcgattcctcaagaagcttcgagaccggatcgacaaggtcggcatc
cggttaccaacaatagaagtgagatttgagcacctaaacgtgaaggccaagtgccatgcc
ggagacagagctctgccgacgctcaccaatacagtaagagacatcgcggagtccgccctc
gccctcttgggcatccgcctcactaagagaaccactctcactatcttgaaggatgtttcg
ggaatcatacaaccctcaaggatgacacttttgttaggccctccatcatctgggaagacc
accctcttgttggccttagctgggaagctcgacccaactctaaaggttaatggagagata
acatacaacgggcacagattggatgaatttgtgccacagaaaactgcagcatacattagc
cagaacgatgtccatttaggagaaatgactgtgaaagagacacttgatttctcagcaagg
tgccagggagtaggagtaagatacgatcttctctcggagctggcgaagagggagaaagaa
gcaggaatatttccggaagccgaagtggatctcttcatgaaggccacagcaattgaagga
gtcgagagcagtcttcagacggactacacactcaggatactggggttggacatttgcgct
gatactatcgtgggagacgagatgcaaaggggcatttctggaggtcaaaagaagcgcgtc
acaacaggcgagatgatggtggggccgaccaaactgctattcatggacgagatctcgacg
gggctggacagctccacgacctaccagatcgtgaaatgcctgcagcagatcgtccacctc
ggcgaggccaccatcctcatgtccctcctccagcccgcccccgagaccttcgacctcttc
gacgacatcctcctcctctccgagggtcagatcgtctaccagggcccccgcgaccacgtc
ctcgacttcttccaatcctgcggcttccgctgccctacccgcaaaggcaccgccgacttc
ctgcaagaggtgacctcgaggaaggatcaggagcagtactgggcggacaagcagcggcca
taccgctacatttcggtctccgaattcgcccagcgattccggagattccacgtcggtctt
cgcttggagaacgagctctccgtcccattcgacaaggcccgcagccacaaggcggctctc
gtcttctctaagaaggttgtctcctattcggagctgctcaaggcttccttcggaaaggag
tggctcctcatcaagcgaaactcctttgtctacatctccaagaccgttatgatcgtcata
atagggctcatagcctcgaccgtgtggctgaggtcacgcatgcactcgaggaacgaagac
gatggggtcatttacataggggctcttttgtttggcttgatggtcaatgtcttcaatggt
ctcgcggagttgtcaattgccatcgaccgtctgccagtattctataagcaccgggacctc
ctcttctacccagcatgggtcttcaccttgcccaattttcttcttcggatacctatctca
atcttggagaccattgtttggactgttatgacctactataccataggatatgcgccagaa
gcaagcagatttttcaagcagctgctgctaatattcttgattcagcagatggcagcaggg
atgttcagaagcattgctggtctttgtaggtccatgatcatagccaacactggtggggca
ctatctgttctcgccatgtttgttcttggaggcttcattatacctaaagaaatgattccg
aattggtggatatggggatattgggtttcaccacttacttatggttataatgctctagcc
gtgaatgagtttttggctccaaggtggatgactcaaatggctccaaataatagaccactt
ggaacggcaatccttcaaaatgccaatgtatttgcagagggaaggtggtactggattgga
gccgctgtactttttgggtttagcatcatcttcaatgtcctattcacagtgtgcctgatg
tttttgaaccctattggaaaacgacaagctgttatatctgaagaaacggcaagggagatg
gaagaagtccaagaggaaggaaaggatttacgaagacttagaaggacaaattctaagagt
gagtctatacctcatgctttgtcaaaaaaggatggaaacaacaccagtgaaattatgatg
attcgaatgagtcctaatctctcaaatggacttaatcatgaaatgtccatcaatgcagcc
actggtgttgctcctaagagaggaatgattcttccttttacacctctttccatgtccttt
gatgaaatcaattactttgtcgatatgcctccagaaatgaaggagcaaggagtcacagaa
gataggctccaactgctaaggaatgttacaggggcttttagaccaggagtcttaacagcc
cttatgggagttagtggtgctggtaaaaccaccctgatggatgttttggctggaagaaag
accggtggctacattgagggtgacatcagaatctcagggtaccctaagaaacaagagact
tttgcaagaatttctgggtattgtgagcaaaatgatatccactcacctcaggtgacagtc
cgagaatctttgatattttctgcttttctccgccttccacatgaagtcagtgatgaagaa
aaaatgaaatttgttgatgaagtgatggacctagtggagcttgacaacctgaaagatgcc
atagtgggtcttccaggagtaactgggttgtccactgaacaaaggaagagactgacaata
gcagtagagcttgttgctaatccttctatcatcttcatggatgaaccgacatctggtctt
gatgcaagagcagcagctattgtcatgagaactgtgaggaacacagtcgatactggaaga
actgttgtttgcacaatccaccaaccaagtatagatatatttgaggcctttgatgaactt
ctgctaatgaaaagaggtggtcaagtgatatactctggacccctgggaagaaattctcac
aagataatcgaatactttgaggcaattcctggagttccaaaaatcaaggacaaatataat
cctgcaacatggatgttagaggtcagctcagttgctgctgaagtacgtttgggaatggac
tctgctcagtattataaatcatcaaatctgttccagtgcaacaaagcattggtgaatgag
ctcagtaaaccagctgcagaaacaagtgatctgtacttccgtacacagtgttcacaatca
tcatggggacagttcaaagcttgcctctggaagcagtggtggacttactggagaagccct
gattacaaccttgtcagatatttctacaccttgatcactgctctactgttaggctccata
tgttggaggattggtcataagggggataattcaaacagtcttagaattgtcattggagct
atgtatgtagcagttatgttcgttggtgtcactaattgtgccactgtgcaaccacttgtt
gcaatcgagaggactgtcttttatagggaaagagcagctggaatgtattcagccttacca
tatgcccttgctcaggtgcttgtggaaataccatatgtgctagttcaaaccatgtacttt
tctcttattatatactccatgatgagcttccaatggacagcagcaaaattcctttggttc
tacttcatctccttcttctctttcctgtacttcacttactatggaatgatgactgtctca
ctctcaccaaatcatcaagttgctgcaatcctagcatccacattctactcggtcttcaat
ctcttctccggctttttcattcctaaaccaagaattcccaagtggtgggtgtggtactac
tggatttgcccacttcaatggacagtttatggactcatagcaacccaatatggtgacctg
gaaactagaatcacagtgactggatctgtagggcaaccgaggcaaaggattaaagactat
atcaaggactactatggatacaatactggcttcatgcctgtagttgccattgtgctagtt
gcctttgccatcttctttgctttcatgtttgcattctgtatcaagaagttgaacttccag
aacaggtag
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integrated database retrieval system
