Zingiber officinale (ginger): 121976977
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Entry
121976977 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121976977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121976977
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121976977
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121976977
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
FAIM1
zf-Di19
Motif
Other DBs
NCBI-GeneID:
121976977
NCBI-ProteinID:
XP_042385369
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All DBs
Position
1B:complement(124309599..124312576)
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AA seq
303 aa
AA seq
DB search
MESDSLECVSLADGLDEEDIAQHVSSKPHAGGAAFPGVSPATSVHELLECPVCANSMYPP
IHQCCNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLQLPCKYSNLGCSEIIL
YYSKIKHEAQCNFRPYNCPYAGSECSVVGDIPSLVAHLRDDHKVDMHTGCTFNHRYVKSN
PREVENATWMLTVFYCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNFSYSLEVGG
NGRKQIWEGTPRGIRDSHRKVRDSHDGLIIHRNMALFFSGGDRKELKLRVTGRIWKEQPN
SDS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggatagcctcgagtgcgtttcgttggcggacgggctggatgaggaggatatc
gctcagcacgtctcgtccaagccgcatgccggaggcgctgcctttcccggggtttctccg
gccactagcgtccacgagttgcttgagtgcccggtctgcgccaactctatgtatcccccg
atccatcagtgttgtaatggccatacactgtgctctacttgtaaatcaagggtgcataat
cgttgccctacatgtagacaagagcttggagatataaggtgtctagccctggaaaaagta
gcagaatcacttcagcttccttgcaagtacagcaacttaggatgttctgaaatcatcctt
tactacagcaagatcaagcatgaagcacagtgcaacttcagaccttacaactgcccatat
gcaggatcagagtgctcagttgttggggatattccttccttggttgcacatttgagagat
gatcataaggtggacatgcacactggatgtactttcaatcaccgttatgtgaagtcgaat
ccacgcgaggttgaaaatgcaacatggatgttaactgttttttactgttttggccaatat
ttctgcttgcactttgaggcctttcagttaggaatggctcctgtttacatggcctttctt
cggttcatgggcgatgagaacgaggcgagaaacttcagttacagccttgaagttgggggc
aatggcaggaaacaaatatgggaaggtactccacggggcattcgtgatagtcaccgtaaa
gtacgtgacagtcatgatggccttattatacataggaacatggcactcttcttctccggt
ggtgaccggaaggaactgaagctgcgggttactggacggatatggaaggagcagccaaac
tccgattcttga
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