Zingiber officinale (ginger): 121977018
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Entry
121977018 CDS
T08725
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00061
Fatty acid biosynthesis
zof00071
Fatty acid degradation
zof01100
Metabolic pathways
zof01212
Fatty acid metabolism
zof04146
Peroxisome
Module
zof_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121977018
00071 Fatty acid degradation
121977018
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121977018
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
zof01004
]
121977018
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121977018
Enzymes [BR:
zof01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121977018
Lipid biosynthesis proteins [BR:
zof01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121977018
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of breast milk
121977018
Exosomal proteins of breast cancer cells
121977018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
121977018
NCBI-ProteinID:
XP_042385427
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Position
4B:complement(138231338..138238997)
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AA seq
696 aa
AA seq
DB search
MNPYLVAIVVPIIASVLFRRSKKAKTRGLPVDVGGEPGVAIRNYRFPSPLQSLWEGVSTL
AELFEHSSKRFQHKPLLGSRRLLARETEVSPDGRSFEKFHLGNYEWISYGDAFKAACSFA
SGLVQLGHKRDEPVAIFSDTRAEWFIALQGCFRQNITVVTIYASLGEEALCHSLNETEVS
TVICGPKELKKVIDIKAQLNTVKHVVYIDEDGVSNEISLDKNTTWVVASFVEVERMGREK
PVVPYLPKSADIAVIMYTSGSTGLPKGVMMTHGNVLATVSAVMTVVPSLGTKDIYMAYLP
LAHILELAAEHVMVAAGTALGYGSPLTLIDTSNKIKKGTKGDTSVLKPTLMPAVPAILDR
VCDGVRKKVDAKGGLSKKLFDISYGRRLAANNGSWFGETSFEKFFWNFLVFRKIQAVLGG
RVRYLLSGGAPLSCDTQRFINICFGATVAQAYGLTETCAGGTFQEADEISLGAVGAPLPC
SYVKLIDWSEGGYLVTDKPMPRGEVVIGGPNVTAGYFKNEEKTKEVYKVDERGMRWFYTG
DIGRIHPGGLLEIIDRKKDIVKLQHGEYVSLGKVESALIVSSYVENIMLHADPFHNFCVA
LIVAAHNTLEDWASKQGINCTDFSDLCQKEETVKEVHGSLLKAAKQSRLDKFEIPAKIKL
IPEPWTPESGLVTAALKLKREAVRKAYADDLQKLYA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttatcttgttgccattgttgttcctattattgcttcggtgttatttcggaga
tcaaagaaggcaaaaacacgaggtttgccggttgatgttgggggagaacctggtgttgca
attcgcaactaccgtttcccttctccattgcaatcactgtgggaaggagtctcaactctg
gctgagctgtttgagcattctagcaaacgcttccagcacaagcctcttcttggatctcgg
agacttttggcaagggaaacagaagtaagtccggatgggaggtcttttgagaagttccac
ctgggaaactatgaatggatcagttatggtgatgcttttaaagctgcctgcagtttcgca
tctggtcttgtgcaacttggccacaaaagggatgagcccgttgcaatattttcagataca
cgagcagagtggtttattgctttgcaggggtgcttcaggcaaaatatcacagttgttaca
atatatgcttcgctaggggaggaggctctttgtcactctttaaatgagacagaggtatcg
actgtaatttgtggaccaaaggaactgaaaaaagtgatcgacataaaagcacagcttaat
actgtaaaacatgttgtttatattgatgaagacggtgtttcaaatgagatttcattggac
aagaacactacctgggtggttgcatcatttgttgaagtagagagaatgggcagggaaaag
cctgtggttccgtatctgcctaaatcagcagatattgctgtgatcatgtacacaagtggt
agcactggtctaccaaagggggtaatgatgacacacggcaatgttctagctacagtttca
gctgttatgactgttgtcccttcccttggtactaaagatatatacatggcatacctacct
ctagctcatattcttgagttggctgcagagcatgtaatggttgctgcaggaactgcttta
ggatatgggtcacctttaactctcattgacacatcgaataagataaagaaaggaacaaaa
ggtgatacttcagtcctgaaacctaccttgatgcctgctgtacctgctatccttgatcgt
gtttgtgatggtgtgcgaaaaaaggtagatgctaagggtgggttatcaaagaaactattt
gatatttcatatggtcgtagattggctgcgaacaacgggagttggtttggagaaactagt
tttgagaagttcttttggaattttcttgtctttagaaagattcaggctgttttaggaggt
cgtgtacgatatctactctctggtggagcacctctttcttgcgatactcaaagatttatt
aacatttgttttggggctacagtagcacaagcatatggtctgacagaaacatgtgctggc
ggaacgtttcaagaagctgatgaaatatctcttggtgctgttggtgctccacttccgtgt
tcatacgtcaagttgatagattggtccgaaggtgggtatttagttacagataaaccaatg
ccaagaggggaggtagttattggaggtccaaatgttactgcagggtacttcaaaaatgaa
gaaaagactaaggaagtttacaaggttgacgagagaggaatgcgttggttttatactggt
gatataggaaggattcaccctggtggcctcctggaaatcattgatcgcaaaaaggatata
gtaaaactccaacatggtgaatatgtctccctaggaaaggtggagtctgctttaattgtg
agttcctatgtggagaacatcatgttgcatgccgatccttttcacaatttctgtgttgca
ctcattgttgctgcacacaatactttagaagactgggcttcgaagcaaggaatcaattgt
accgatttttcagatttatgccaaaaagaggaaactgtgaaagaagtccatggttcactg
ctcaaggcggcgaaacagtctcgactggataagtttgagatcccagctaagatcaagttg
attcctgaaccatggacccccgaatctggtctggtcactgctgcactcaaactcaagaga
gaagccgtcagaaaggcatatgctgatgaccttcaaaagttatacgcgtga
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