Zingiber officinale (ginger): 121977090
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Entry
121977090 CDS
T08725
Name
(RefSeq) AP-4 complex subunit epsilon-like
KO
K12400
AP-4 complex subunit epsilon-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121977090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121977090
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Others
AP-4 complex
121977090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
HEAT
INTS1_R4
HEAT_EZ
PDS5
TOR1L1_N
NPHI_C
Spem1
Motif
Other DBs
NCBI-GeneID:
121977090
NCBI-ProteinID:
XP_042385539
LinkDB
All DBs
Position
4B:139268777..139278852
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AA seq
967 aa
AA seq
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MEQLKTIGRELAMGSQGGAWAGQSKEFLDLVKSIGEARSKAEEDRIILREIESLRRRIAE
PDVPRRRMKDYIIRLVYAEMLGHDASFGYIHAVKMTHDDSLPLKRTGYLAVTLFLNDDHD
LIILIINTIQKDLRSDNYLVVCAALTAACKLINEETIPAVLPQVVDLLAHPKETVRKKAV
MTLHRFYQRSPASVSHLISNFRKRLCDSDPGVMGATLCPLFDLITEDVNSYKDLVASFAS
ILKQVAERKLPKTYDYHQMPAPFIQIKLLKILALLGSGDKQASGQVYNVLSDLFRKCETS
SNIGNAVLYECICCVSSIYPNVKLMDAAIEATSKFLKSDSHNLKYMGIDALGRLIKINPD
IAEEHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVERMIDYLISIDDNHYKADI
ASRCVELAEQFAPSNQWFIQTMNKVFEHAGDLVNSRVAHNLMRLIAEGFGEDDEGADSQL
RSSAVDSYLRILGEPKLPSLFLQVICWVLGEYGTADGKYTAAYIIGKLCDVTEAHLCNDT
VKAYAISAIMKICAFEIAAGRKVEMLPECQSFLDELSASHSTDLQQRAYELQALLCLDSQ
AAGNVMPLDASCEDVEIDKDLSFLINFVQQSIEKGANPYLPESERLGMSGVSNFSSPYQQ
EASSHSLRFEAYELPKPSSIPVIPQPFISTSTTDLVLVPDTTYYRENNQASKLIVGPEAS
SADAGIKLRLDGVQKKWGKPTYSSSSSITTSVEKTTNGVVAHQDGIRSHSRDTTYDSRRQ
QPEVSVEKQRLAASLFGASASKTEKKATMAQKAPKGNSTNAEKSSVVRSVSPGTSKDKTA
PPPDLLDFGEPVPTSAPTIDPFKELEGLIEPASALGPLYNTVKTGGDKAQDLMALHMDTP
PSVSRTSLSLASEGTYSTDKSSYTEKPMIAVKKGPNLQDALHKDATARQVGVTPTGNNPN
LFRDLLG
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctgaagacgatcgggagggagctggcgatgggctcccagggcggcgcgtgg
gcgggccagtccaaggagtttctggacctggtgaagtcgatcggagaggcgcgctccaag
gcggaagaggaccgcatcatcctgcgggagatcgagtcccttcgacgcaggatcgccgag
cccgacgtgccgcgacgcaggatgaaggattatattattcgcctcgtctacgccgagatg
cttggccatgacgcctcctttggctacatccacgctgtcaagatgacccacgacgattcc
ctccctctcaagcgtaccggctacctcgccgtcaccctattcctcaacgacgatcatgat
ctgatcatactaatcatcaatactatccagaaggacctccgttcggataactatctggtt
gtctgcgctgccctcactgccgcctgcaagctcatcaacgaggagactatccctgctgtt
cttcctcaggtggttgacctccttgcacatccaaaggaaaccgtgcgcaagaaggccgtg
atgacactccatcgcttctaccaacgttcacccgcctccgtgtcccacctcatttccaac
ttcagaaagaggttgtgtgatagtgatcctggagtgatgggcgcaacactttgccctctt
tttgatctcatcactgaagatgtaaattcatacaaggatctcgtcgccagctttgccagc
attcttaagcaggtagctgagagaaaacttccaaagacatatgattatcatcaaatgcct
gctccatttattcagataaaactactaaagattcttgcattactcggtagtggtgataag
caagcaagtggccaagtttataacgtacttagtgacttattcaggaaatgtgaaacatca
agcaacattggaaatgctgtgctatacgaatgtatatgttgtgtctcatccatctatcca
aatgttaaattgatggatgctgctatagaagccacttccaagtttttgaagagtgatagt
cataacctcaaatacatgggcattgacgcacttggaagacttattaaaataaatccagat
attgctgaagaacaccaacttgctgttattgattgcttagaggatcctgatgatacctta
aagcgcaagacctttgaattactctataaaatgacaaagtcctcaaatgtcgaagtaata
gttgaacgtatgattgattatttgataagcatcgatgataatcactacaaggcagatatt
gcatcacgttgtgttgagcttgctgaacaatttgcaccaagcaaccaatggtttatccaa
acaatgaataaggtctttgagcatgcaggcgatcttgttaattctagagttgcacataat
ttaatgcgacttattgctgaaggatttggagaggatgatgaaggtgctgacagtcaactt
agatcctctgcagttgattcttacttgcgcattcttggggaaccaaagcttccttctttg
tttttgcaggtcatatgctgggttcttggagaatatggaactgcagatgggaaatacact
gctgcttatataattggaaagttatgcgatgttactgaggcgcatttatgcaacgataca
gtcaaggcttatgcaatatcagcaatcatgaagatttgtgcatttgagattgctgcagga
agaaaagtggaaatgttgcctgagtgtcagtccttccttgatgaactatctgcatcacat
tcgacagacttacagcaacgtgcttatgagctacaagcattgttgtgtttagatagtcaa
gcagctggaaatgtcatgccacttgacgcaagctgtgaagatgttgagattgataaggat
ctttcgttcctgatcaattttgttcaacaatccattgagaagggagcaaatccatacctt
cccgagagtgaacgactaggcatgtctggtgtaagcaactttagtagtccataccagcaa
gaagcttccagtcattcacttagatttgaagcatatgagcttccgaaaccatcttctata
cctgttattcctcaaccattcatttcaacttcaactacagatcttgttctagtgcctgat
actacttattacagagaaaacaatcaagcttctaagctaattgttggccctgaagcctct
tctgcagatgctggaattaagcttcgacttgatggtgttcagaagaagtggggtaaacct
acatattcatcttcttcgtctatcactacctcagtggagaagacaacaaatggagtcgtg
gcacatcaggatggcatcaggtctcattcacgagataccacatatgattcaaggagacaa
cagcctgaagtttcggtagaaaaacaaaggttagcagcatcactttttggtgcttcagcc
agtaaaactgagaagaaggcaacaatggcccagaaggcacccaaaggaaattctacaaac
gctgagaaatccagcgtggtcagatctgtcagtcctggaacttccaaggataaaactgcc
cctcctcctgatctccttgatttcggggaaccagtccctacaagtgcaccaactattgat
cccttcaaagagttggaaggacttatagaaccagcttcagcactgggcccgctctataat
accgtcaaaactggtggtgacaaagcacaggatctgatggcactgcacatggatacgcca
ccaagtgtatccaggacttctctcagtttggcttctgaaggcacctattctaccgataag
agttcatacacggagaaacccatgatagcagttaaaaagggtccaaatctacaagatgca
ttgcacaaggatgcaaccgccaggcaggtcggtgtgacacccactggaaataaccccaac
ttgttcagagacttgttgggctga
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