Zingiber officinale (ginger): 121977099
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Entry
121977099 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121977099
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121977099
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121977099
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4
vWA-TerF-like
Prok-RING_4
TerY_C
Sina_RING
zf-RING_5
ClpS
zf-RING_2
zf-C3HC4_2
IBR_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
121977099
NCBI-ProteinID:
XP_042385550
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All DBs
Position
4B:complement(139432623..139439229)
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AA seq
447 aa
AA seq
DB search
MGGGSSRDSGERDWNYGSSSYSPREAPGYQSYPPPASSSSYAYPPPPSYAPPPSYAPSPS
HSEPHQPQGGRRIDRRYSRINDDYHTVDQVTDALSRAGLESSNLIVGIDFTKSNEWTGKV
SFGRRSLHHIGDTQNPYEQAISIIGRTLSAFDEDNLIPCFGFGDASTHDQGVFSFYPDGR
PCNGFQDALQRYRELVPHLRLAGPTSFAPLIEMAMTIVEQSGGQYHVLVIIADGQVTRSV
DTHSGHLSSQEQKTVDAIVKASGFPLSIILVGVGDGPWDMMKEFDDNIPARAFDNFQFVN
FTEIMSRNIPQPRKEAAFALAALMEIPSQYKATLELGILGRQSGKSPQKVPLPPPNGGYN
ASSVSSNNYKSTSFQRSAPLYPEYETTSSAPPEPPSSSLESQVCPICLTNPRDMAFGCGH
LTCSQCGPSLLICPICRRDISTRIKLY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggggggtggaagctctagggattcgggagagagggattggaattacggcagtagtagt
tattctcctcgcgaggcgcctggctatcagagttaccctcctccggcttcgtcttcgtcc
tacgcttatcctcctcctccttcttatgctcctcctccgtcttatgctccttctccctct
catagcgaaccccatcagccgcagggtgggcggaggatcgacaggaggtactcgaggata
aacgacgactaccataccgtggaccaagtcactgatgctctttcaagggctgggctcgag
tcttccaatcttattgttggcattgatttcacaaagagcaatgagtggacaggtaaagtt
tcatttggcagaagaagcttgcatcatattggtgatacacaaaatccttatgaacaagct
atttctataattgggagaaccttatcagcatttgacgaagacaacttgattccatgcttt
ggatttggagacgcatccacgcatgatcagggtgtctttagtttttaccctgacggaaga
ccatgtaatgggtttcaagatgctttgcagcgatatagagagcttgtgccccatttgcgt
ctggcaggtccaacctcttttgcaccactaattgaaatggctatgaccattgtagaacaa
agtggtggtcaataccatgttttggtgataattgctgatggtcaggttacaagaagtgta
gacactcattctggtcatttaagctcccaagaacaaaagactgttgatgccatagttaaa
gcaagtggatttccactgtccataattttggttggagttggagatggcccttgggacatg
atgaaagaatttgatgataatatccctgcccgtgcgtttgataattttcagtttgtcaat
tttacggagataatgtcaaggaacataccccaacccagaaaagaagcagcatttgctctt
gctgcattgatggaaattccttcccagtacaaggcaactctagaactggggattttgggt
cgtcaatctggaaaatctccacagaaggtccctcttcctccgcctaatggaggttacaat
gcatcatctgtttcaagtaacaattacaaatcaacgagcttccagaggagtgcgccactc
taccctgaatatgaaacaacatctagtgcacctcctgaaccacccagttcatcattagaa
tcccaggtatgccctatttgcctcacgaatccgagagacatggccttcggctgcggacac
ctgacgtgttcacaatgtggtcctagtcttctgatatgcccgatctgccgtagagacatc
agtaccaggataaagctctactga
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