Zingiber officinale (ginger): 121977128
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Entry
121977128 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121977128
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121977128
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121977128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-C3HC4_3
RING_XB3-XBAT31
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
121977128
NCBI-ProteinID:
XP_042385610
LinkDB
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Position
4B:139727608..139730597
Genome browser
AA seq
183 aa
AA seq
DB search
MVMPPSGDVCCVCHERFRLPCQANCSHWFCGNCILRVWNSGFVLQPCKCPLCRRAITLLI
PASTINEDHDREAYQVLQSIENYNRQFGRNPSLIQRFQDVPFFIRRLLREFMDPQRALPF
VFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRH
GGA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggttatgccgccgtccggcgatgtgtgctgcgtctgccacgagcggtttcggctcccc
tgccaagccaactgttcgcactggttctgcgggaattgtattctgagggtctggaattct
ggatttgtgctccagccatgcaagtgtcccctatgccgtcgtgctataactctgcttata
cctgcatcaacgataaatgaggaccatgaccgggaagcttatcaagtacttcagagtatt
gagaattacaatcgccagttcggcagaaacccaagccttattcagaggtttcaggatgtt
ccattcttcataagaaggttattgagagaatttatggatcctcagagagcacttcccttc
gtcttcagagcacgaacagccttgtctgtattactgagtattggttatgttgcgagcccc
ttcgacattttatcagaaaggatttatggttttgttggttttctcgatgatttcttagta
ctggtgatggtgttcatccaccttgctaacatgtatcgcggtttacttctgaatcgccat
ggaggtgcttaa
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integrated database retrieval system
