Zingiber officinale (ginger): 121977323
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Entry
121977323 CDS
T08725
Name
(RefSeq) syntaxin-71-like
KO
K08506
syntaxin of plants SYP7
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121977323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121977323
Membrane trafficking [BR:
zof04131
]
SNARE
SNAP-25[C] (Qc)
Syp7
121977323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
DUF5089
Ran-binding
PYNP_C
FliJ
ABC2_membrane_3
Hydro_N_hd
STX6_10_61_N
NPV_P10
Motif
Other DBs
NCBI-GeneID:
121977323
NCBI-ProteinID:
XP_042385844
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Position
1B:125489559..125498631
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AA seq
266 aa
AA seq
DB search
MSVIDILTRVDVICKKYEKYDVDKLNADNVSGDDAFARLYASVESDIESALQKAEAASNE
KNRAAVVALNAEIRRTKARLLEEVPKLQRLAVKKVKGLSKEEIATRSDLVSALPDRIQSI
PDGSTNGAKAGGWTASGSRTDIRFDSTSDGRFDSEYFQQTEESNQYRQEYEMRKMKQDQG
LDVISEGLDTLKNMAHDMNEELDRQVPLMDEIDAKVDKATSDLKNTNVRLKQTVNQLRSS
RNFCIDIILLCIILGIAAYLYNVLKK
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcatcgatatccttacgcgagtcgacgtaatctgcaagaagtacgagaagtac
gacgtcgacaagctcaacgccgataatgtttccggcgacgacgccttcgcccgcctttac
gcgtccgtcgagtcggacatcgagtccgccctccagaaagcggaagcagcctccaacgag
aagaatcgggcggcagttgtggcgttgaatgccgagatccgccgaacaaaggcgcggttg
ttggaggaggtcccgaaactgcagaggttggccgtgaagaaggtaaaagggctctcaaag
gaagaaattgctacacggagcgacttggtatcagctctaccggacaggattcagtcaatt
ccagatgggagcacgaatggtgcaaaagctggtggctggacagcttctggttctcgcaca
gatattagatttgactctacttcagatggaagattcgacagtgagtactttcagcagact
gaagagtcaaaccaatataggcaagagtatgagatgcgcaaaatgaaacaagatcaaggt
ttggatgttatatctgaaggactggatacacttaaaaacatggcacacgacatgaatgaa
gaattggacaggcaagtacctttgatggatgaaattgacgcgaaggtggacaaggctact
tctgacttgaagaataccaatgtcaggcttaagcagactgttaatcagcttagatccagt
cgcaacttttgcattgatataatcttgctgtgtattattcttggtattgctgcgtatctg
tacaacgttctaaagaaatga
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