Zingiber officinale (ginger): 121978159
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Entry
121978159 CDS
T08725
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
121978159
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
121978159
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
121978159
NCBI-ProteinID:
XP_042386469
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Position
4B:23536933..23540278
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AA seq
613 aa
AA seq
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MDNGIVRLTLSNPEGFITEVMYNGVDNLLEVHSSEPYGGYWDVVWNEEENKEIFELIEGS
QFQKIYQDDKKIEVSFKKKWNPSLKGKRSPLNIDKRFVLLQGSSGFYTYAIYEHGKGWPD
FQITETRIAFKLRKEKFHYMAITDNRQRVMPMLQDRSPKRSQKLAYPEAVILVKPTNPAL
RGEVDDKYQYSSEYKGSLVHGWICAKPSIGFWLITPSNEFKSGGPLRQDLTSHVGPTVLG
MFHSSHYAGEEIVAKFTNGEYWKKVFGPVFIYLNSDLKNSRPNFLWEDAKRQTQIVVANW
PYEFPTSVDYLKKEQRGSVSGRLLILDKYISKNYIYGNAAFVGLASPGEEGSWQKETKGY
QFWVRANAKGNFFIKNVLSGVYNLYAWLPGFIGEFTYSTTITVTSGGNIDLHNLVYRPPR
DGPTLWEIGIPDRSAAEFFVPDPNPKYVNKLYIEHDKFRQYGLWERYADLYPTTDLIYQV
GVSNYTKDWFFAQVTRKQKDNSNKATWQIKFQLSSLHRTGVYKLRVALASAHLSKLQVRI
NDPTIEPAHFTTGLIGRDNAIARHGIHGFYWLFNISLQGSWLREGENTIFLTQSQSQTMF
QGIMYDYIRMEAT
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggacaatggcattgtccggctgacattgtcaaaccccgaaggctttatcactgaagtt
atgtacaatggagttgataatttactggaagttcatagtagtgaaccgtatggagggtac
tgggatgttgtttggaacgaagaggaaaataaagaaatatttgaattaatagaaggaagt
caatttcaaaaaatatatcaagatgacaagaaaattgaagtgtctttcaagaagaagtgg
aatccctccctcaaaggcaagcgttctcctctcaacatagacaaaagatttgtattattg
caaggtagctcaggattctacacatacgccatctatgagcatggtaaaggatggccagac
ttccaaataacagaaactagaatagctttcaagcttagaaaagagaagtttcattacatg
gcgatcacagataatagacaaagggtcatgcctatgcttcaggatcgttcgcctaagaga
tcacagaagttagcctaccctgaggcagtcatccttgttaaaccaactaatccagccctt
agaggagaggtggacgacaaatatcaatactccagcgagtacaaaggcagcttggtgcat
ggatggatttgtgctaagccttcaattggcttttggttaatcactccgagtaatgagttc
aagtcaggaggacctctcagacaagatttaacatctcatgttggccctactgtcctcggt
atgttccatagttctcactatgctggggaagaaattgttgctaaatttacgaatggtgaa
tactggaagaaagtgtttggcccagtattcatctaccttaattctgacttgaaaaactca
agaccaaactttctttgggaggatgctaaaagacagacccaaattgtagtggcgaattgg
ccttacgagtttccaacttcagtggattatcttaagaaagagcaaagaggatctgtttct
ggaaggctacttattttagataagtacattagtaaaaattacatatatgggaatgcagct
tttgttggtttagcttctccaggagaagaaggatcttggcaaaaagaaaccaagggatac
caattttgggtaagagcaaacgccaaaggaaatttctttataaaaaatgttctctctgga
gtttataatctgtatgcatggcttcctggtttcattggagaatttacttatagcaccaca
attacagtcacctcaggaggtaatatcgacttacacaaccttgtatatagaccaccaaga
gatggcccaaccttgtgggagattggcattcctgatcgctctgctgcagagttctttgtt
cctgatccaaatcctaaatatgtcaataaactttacattgagcacgataagtttagacaa
tatgggttatgggagagatatgcagatttgtatcctacaactgatttaatttaccaagtt
ggtgtcagtaattatacaaaagactggttctttgctcaagttaccaggaagcaaaaagat
aattccaataaagcaacatggcagataaaatttcaactttctagtttacataggactgga
gtttacaagctcagggtggcacttgcttctgcacacctttctaaactacaagttcgaatc
aatgacccgactatagaacctgctcacttcacaacagggttgattggtcgtgacaatgca
attgcaaggcatggaatccatggtttttattggttgttcaacattagtttacaaggaagt
tggcttcgtgaaggggaaaacacaatattcttgactcaaagtcaatcccaaaccatgttt
caaggaatcatgtatgactatatccgaatggaagcgacatag
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