Zingiber officinale (ginger): 121978185
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Entry
121978185 CDS
T08725
Name
(RefSeq) protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121978185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121978185
Membrane trafficking [BR:
zof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121978185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
DUF659
Sec23_helical
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
121978185
NCBI-ProteinID:
XP_042386495
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Position
4B:32388003..32460580
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AA seq
1126 aa
AA seq
DB search
MESTSPPFALGPPRQRPGMVPNATSVPQTPQIGQPMASSSIPPPFAPTFLGSSRPAPTPF
ASRPPPPGAIPQGPIASNGPPNSGFIAPRAFPPPSAQQAPALAASSSIRAPPPSVAPTQG
SGLRQYPGSPPSGASMAAAASPFIGPPASQHFGRPPTSQSPFSGPLAPQLPFAGPPSSQR
PLVGSMNSQLPLAGPATSQLSFGGPLTSQSPFAGPPTSQAPFAGTPTSQPPFTGQPTLQR
PFARSTTPQPPFAGLPTSQQFGGPPTQTFTGPPISQFVSPLTSQPYSSRPSSPSYMATPY
SQPFSKPPTVGTTFSSPVWPSQPGQVVPSLPGNVQAPPRMFGVPPGMPSQQIPPVPPAMG
HSALAGPQVSTQSKIDPNQIPRPLPSSSITLFETRQGNQANVPPPATSNFVVKDNGNSSP
RLMRCTLNQIPCTGDLLSTSGMPLTLMVQPLSLPHQSEEPIQVVDFGESGPIRCSRCKSY
INAFMRFTDHGQKFICNLCGFTNETPRDYYCNLGPDGRRRDADERPELCKGTVEFVATKE
YMVRDPMPAVFFFLIDVSLNAVQTGATAAACSAISQSLADLPDGPRTMVGIATFDCSIHF
YNLRRASQQPLMLIVPDVHDVYTPLHTDVVVPLTECRQSFEQLLESIPSLFENNKVADSA
FGAAVKAGFLALKPTGGKLLVFQSVLPSIGIASLSSREAEGRTNISAGDKEAHKLFQPAD
KTLKTMAIEFAEHQVCVDIFITAQTFVDIASISVVPGTTGGQVYYYYPFSAVSDPGKLYN
DLRWNLSRPQGFEAVMRVRCSQGLQVQEYAGSFCKRIPTDIDLPAIDCDKTIMVTFKYDD
KFQENSECAFQCALLYTTVYGQRRIKVINLSLPCTSMLSNLFRTADLDTQFACILKQAAS
SILVNSLSQVREQIINLCINILHAYRKFCATVSSSGQLILPEALKLLPLYTLGYLPPGYN
LLRTSLLQKEKAHIEKLLEPTKTIWKQKGAINFEGEYKDKIFISKLLINAINEVGHQNVV
QVVTDNAPVCKIVGLLVEAKYPHLFWTLCVVHILNLALKNICAPTDSLRNKEAFDECKWI
AEVANDASMIKNFILNHNMRLSMFNDNSNLKMLTCGYSICFHDHYA
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgacctctccgcctttcgccctggggcctcctaggcagcgtccagggatggtg
cccaacgctaccagcgtccctcaaactccccagatcggccaaccgatggcctcctcatca
atcccgcctccgttcgcgccgactttcctcggatcctcccgcccagcccctacccctttc
gcatcccgcccgcctccaccaggggccatcccacagggcccgatcgccagcaacgggcct
ccaaattccggatttattgcgcctcgggccttccctccgccttcagcacagcaggcgccg
gctttggccgcctcgtcatcgatcagggcaccccctccgtctgttgcacctactcaaggt
tcgggcctccggcagtatcctggaagtccaccttccggggcttccatggcagctgccgca
tctccgtttataggccctccagcatctcaacattttggaagaccgcctacctcccaatca
cccttctctggtcctctggcaccacagcttccttttgctggaccaccgtcctcacaacgt
cctttggttggatcgatgaactcacaactgccccttgccggaccggctacctcacagttg
tcctttggcggaccgctcacttcgcagtcgccttttgcaggaccacccacttcccaggcg
ccctttgcaggaactccaacttcacaaccgcccttcactggacagcctactttgcagcgg
cccttcgccagatcgaccacccctcagccacccttcgccgggctgcccacctctcagcaa
tttggtggaccacccactcagacatttaccggtccgccaatttcacagtttgtcagtcca
ctaacctcgcagccgtattcatctcggccatcttcaccgtcgtatatggccactccatat
tcacagccattttccaagcctccaaccgtgggcactacttttagttctccagtttggcca
tctcagccaggacaggtggttccttccttgcctggtaatgtgcaagcacctcctaggatg
tttggcgtgccaccaggcatgccaagtcaacaaattcctccagtcccacctgctatgggc
cattcagccctagcagggcctcaggtctccacacagtcaaagatagatccaaaccaaatt
cctcgacctttgccaagttcgtcaatcacactatttgaaactcgtcagggaaatcaagca
aatgtacctccgcctgcaaccagcaattttgttgttaaggataatggaaattccagccct
cgtttgatgaggtgcacactgaatcagattccatgcactggggaccttctatctacctct
ggtatgcctctcaccttaatggtgcaacccttgtcacttccacatcaatcggaggagcct
atccaagttgtcgactttggtgaaagtggacctattcggtgttctagatgcaaaagttat
ataaatgctttcatgaggttcactgatcatgggcaaaaatttatttgcaatttatgtggt
tttaccaatgaaactccacgggactactactgtaatcttgggccagatggtaggcgtcgt
gatgcagatgaaaggcctgaactttgcaaaggaacagttgaatttgttgctacgaaagaa
tacatggttcgtgatcccatgcctgctgtcttcttttttctcattgatgtttcactgaat
gctgtacaaactggtgcaactgctgcagcttgcagtgcaatcagtcagtctctggcggat
cttcctgatggtccaaggacaatggtcggtattgcaacttttgattgcagtattcatttt
tacaatctgagacgagcctcgcagcagcctttgatgctcattgtgccagatgttcatgat
gtttatacacctcttcatactgatgtagtggttcctcttaccgagtgccgtcaaagtttt
gaacagttactagagagcatcccaagtctgtttgaaaataataaggttgctgattctgca
ttcggtgctgcagtcaaggctggattcttggcacttaaacctacaggaggaaagcttctt
gttttccagtcagtcttgccatcaattggtattgcatctctttcttccagagaagctgaa
gggagaacgaatatttctgctggtgataaggaggcacataagttgtttcaaccagcagac
aagacactgaaaacaatggccattgagtttgctgagcaccaggtttgtgttgatatattt
atcaccgctcagacttttgtggacattgcttccatttccgttgttcctggaactactgga
ggacaggtatattattattatccattttctgctgtctctgatcctgggaaactctacaat
gatcttagatggaatcttagtagaccccaaggttttgaggcagtgatgcgggttagatgc
agccagggccttcaagttcaggaatatgctggaagcttttgcaagcgcattcccactgat
attgatcttcctgcaatagactgcgataaaactataatggttactttcaaatatgatgat
aagttccaggagaattcagaatgtgcctttcagtgtgcacttctttacactactgtgtat
ggtcaaagaagaattaaagttataaacctctcccttccttgcactagcatgcttagcaat
cttttccgtacagctgacttggatacccagtttgcctgtatcctcaagcaagcggcaagc
agcatcctagtgaactcgctttctcaagtccgtgagcagatcataaacctctgcatcaac
atcttacatgcctaccgtaagttttgcgcgacagtatcatcttcaggccagctaattctt
cctgaagctctgaagctattgcctctctatacgctaggttatcttccacctggatacaat
ttattgagaacttcacttcttcaaaaagaaaaagctcatattgaaaagctgttagagcca
acaaaaactatttggaaacaaaagggggcgataaattttgaaggcgagtacaaggataaa
attttcatctctaagttgctcattaatgctataaatgaagtgggacatcagaatgttgtc
caagtggtcacagataatgctcctgtttgcaaaattgttgggttactcgttgaggcaaag
tatccacacctattttggactctttgtgttgtgcacatattgaatcttgctttgaagaat
atttgtgcaccgactgactctctacgaaacaaagaagcctttgatgagtgcaagtggata
gcagaagtagcaaatgatgcttcaatgatcaagaattttatcctgaatcacaatatgaga
ttatcgatgttcaacgataactcaaacttgaagatgctcacttgcggatactcgatttgc
ttccacgatcattacgcttaa
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