Zingiber officinale (ginger): 121978330
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Entry
121978330 CDS
T08725
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24-like isoform X1
KO
K11841
ubiquitin carboxyl-terminal hydrolase 10 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
121978330
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121978330
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121978330
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121978330
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121978330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
121978330
NCBI-ProteinID:
XP_042386626
LinkDB
All DBs
Position
1B:127708684..127718468
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AA seq
536 aa
AA seq
DB search
MSDRKFIMFGSFTEDETRLFQSQYFNRTHSLDKAGQPCGSLDLTSNLYKGSTNGPKVDTS
SEKSEDLNVSDDISDLIYVEEAVKVNDSLQKVTVAQTKGSTIDSCQSYRSIETGKDALGV
TSLCVTDKGNSGVDLSEPKDQEGWIQTSNADTFSPFSLAVECPKADVPRTWAEKGGTAES
IRPRGLINLGNLCFLNATLQALLACSPFVGLLQDLRNRNISKMDYTTLYAFVEFISEFDM
PDNLSAKASGKAFLESGKPFSPNMFDVVLKRFTPDMPTGISSRPRQEDAQEFLNFIMDQM
HDELLKLNGNFSNRNDGENALISSTEDEGWETVGPKNKSAITRTQSFMPSQLSAIFGGQY
KSVVKARGKKASATVQPFLLLHLDIFSESVNTIEDALHLFAASESLEGYRISDGSAGSVS
ASKSVKIQQLPKIMILHLMRFSYGSRGSTKLHKPVRFPLDLILGRELLASPTSESRRYEL
VATITHHGQGPSHGHYTTDAKTSTSHWLRYDDSSVMAITANKVLDDHSYILFYKQT
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcgtaagttcatcatgtttgggtcattcactgaagatgagactagattgttt
cagagtcaatatttcaatcgtacgcactctttggataaggctggacagccatgtgggtca
ttggaccttacctcaaatttgtataaaggttctactaacggaccaaaggttgatacttca
tctgaaaaatcagaagatcttaatgtttcggatgatatttcagatctaatatacgttgaa
gaagctgtcaaagtaaatgacagcttacagaaggttacagtggcccaaacaaagggatca
accattgattcttgccagagttataggtcgatagagacagggaaggatgccttaggtgta
acgtctctctgtgtaactgacaagggcaattctggtgttgacttgtcagagccaaaggac
caagaaggatggattcaaacatcaaatgctgatacttttagtcccttttctttggcagtt
gaatgccctaaggcggatgtcccaagaacatgggctgagaaagggggaacagctgaaagt
attcgaccaagaggtttaataaatttaggaaatctgtgtttcttaaatgcaacattgcag
gcacttttggcttgttcaccttttgtcgggcttttgcaggatttgaggaatagaaatatt
tctaagatggactatacgacattgtatgcatttgttgaatttatctctgagtttgacatg
cctgataacttaagtgcaaaggctagtggaaaggcattccttgaaagtggaaaacctttc
agtcctaatatgtttgatgtggttctgaaaagatttactccagacatgccaactggtata
tcaagcagaccaaggcaagaagatgcccaagagttcttaaattttatcatggatcaaatg
catgatgaactgttgaaacttaatggtaacttctccaacagaaatgatggtgaaaatgct
ctcatttcttctactgaagatgaagggtgggaaactgttggaccaaagaataagtctgct
atcaccagaactcagagctttatgccatcacagctaagtgcaatatttggaggccaatac
aaaagtgtggtgaaggcaagaggaaagaaggcttcagctacagttcagcctttcctattg
ctccaccttgacatattttccgagtcagtgaatactattgaagatgctctacatctgttt
gctgcttctgaaagtcttgaaggatatagaatatcagatggctcagctggttcagttagt
gccagcaagtcagtgaagatacaacaactgcccaagataatgatattgcatctcatgcgg
tttagctatggaagcagaggaagcacaaagctgcataagcctgttcgttttccacttgat
ctgattcttgggcgtgagctcctagcatcaccaacttcagagagccgaagatatgaactt
gtggcgactatcacacaccacggtcaagggccttcacatggtcactataccactgatgca
aagacttctaccagccattggcttcgttatgatgattcatcagtgatggctatcaccgca
aacaaagtcttggacgaccattcttatattttgttttataaacaaacttag
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