Zingiber officinale (ginger): 121978333
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Entry
121978333 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC121978333
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121978333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121978333
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121978333
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121978333
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121978333
NCBI-ProteinID:
XP_042386625
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Position
4B:80552813..80557315
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AA seq
333 aa
AA seq
DB search
MVGGGSRRHDGPLKINSTNVFAVLETLKKKKKSDKESKSKGASKSQGKEQEKQVFWALAP
LPLLFIAEKDYPFCMIRDACEITVVHQEDAGLNVEMAKLTFAKGIWSFVSKTNSALRGYS
SHPSRSVLVPALLRLIKKCGLLRPTLYHIVFWPVCGSALVPSFWCLQGLHNIHGSFNLPT
VPGSLASRDVAMGVVPSGGVQQPGGSIPSGRFSSNNLLVALSQMPHGSGVTNRGGINVVG
NHAFSSSNINGVTGSITGISSSSAYGNRSSVPGLGVSPVLSNVGPRLTSSVGNIVGSGNM
GRSISSGGLSVLGLASRVNLAIMHRARRIMLAQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggtcggaggcggaagcaggaggcacgatgggccgctgaagatcaatagcactaacgtc
ttcgcggtgcttgagactctcaagaagaagaagaagtcggacaaagagtcgaagagcaag
ggggcgtccaagagccaagggaaggagcaggagaagcaagtgttttgggccctggcgcct
ctaccacttcttttcattgccgagaaagactatccattctgtatgattagagacgcctgt
gaaataacagtggttcatcaagaagacgctggcctcaacgttgagatggcaaaactgaca
ttcgccaaaggaatatggagctttgtgagtaagacaaacagtgctttgcgtggatattcc
tctcatcctagtcgctcagtattagtccctgctcttcttagacttattaagaagtgtgga
ctcctcaggccgaccctataccacattgttttctggccagtctgcggcagtgccttggtt
ccatccttctggtgtcttcaaggattgcataatattcatggaagcttcaacctgccaact
gtgcctggttcgcttgcatccagagacgtcgcaatgggtgttgtaccatcaggtggtgtt
cagcaaccaggaggaagcattcctagtggacggttctcatcaaacaatcttttggttgca
ttatctcagatgcctcatggctctggtgtcacaaatagagggggtattaatgttgttgga
aatcatgcttttagtagtagtaatattaatggagtcactgggtcaataactggtatttcc
tcaagttcagcttatgggaatcgtagttctgttcctggtttgggagtttctccagtattg
agtaatgtagggccaagacttacaagctctgtaggcaacattgttggcagtggtaacatg
ggaagaagcatcagttctggaggattatctgtgctcggtttagcttcacgggtaaactta
gctattatgcacagagcaagaaggataatgttggcacagtaa
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