Zingiber officinale (ginger): 121978358
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Entry
121978358 CDS
T08725
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Module
zof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121978358
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
121978358
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
121978358
NCBI-ProteinID:
XP_042386648
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Position
4B:86079341..86081264
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AA seq
412 aa
AA seq
DB search
MALHTSVFLCFSIFFSSSFQKHAFGQDNDNVATLHARLADRVYSVEEFGARGDDRSFDNQ
AFEEAWHKACSCKTASVLLVPNHKYRLRPIRFCGPCKNHITVKIEGTLEASPDPSHWNTH
NLGYWILFDSVKNLVVQGGGTINGNGKKWWQKSCKTNNSLPCVGAPSALFFNSCKNLVVK
DLKMKDSQQIHLNIQKSMNVKASNLSIIAPESSPNTDGIHVGESSNILIRDTIIRTGDDC
ISIVNGSRQILTKNIVCGPGHGISIGSLGAKHTKESVSNVFVNDVILKNTTNGIRIKTWQ
GGQGYAKDITFQNITMHNVKNPIIINQNYCDSKLPCHEQDSAVEVSHVLYKNIKGTSASR
EAMTFNCSNNVGCHHIVLQNIDLVGEGGEVVTSACNNFKWQGIGKIIPSLCA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcatacttctgttttcctctgcttttcgatcttcttctcctcctccttccaa
aagcatgcatttggccaagataatgataatgttgctacgctacatgctcgcttagccgat
cgagtttacagtgttgaggaatttggtgccaggggagatgatagatcgtttgacaaccag
gcatttgaagaggcatggcataaggcttgttcttgcaaaacagcctctgttcttttggtg
cctaatcacaaatacagattaaggcctattagattctgtggtccttgcaaaaatcatatc
acagtgaagattgagggaacgcttgaagcttctccggacccctctcactggaacacccac
aatttggggtattggatattgtttgatagcgtgaaaaacctagtggttcaaggtggtggg
acgatcaatgggaatggcaaaaaatggtggcaaaagtcatgcaaaactaacaattccttg
ccttgtgtcggcgcaccctcggcattgttcttcaattcatgcaagaacttggtggtaaag
gatctcaagatgaaagatagccaacaaatccatctaaacattcaaaaaagcatgaatgtc
aaagcttcaaatctgtcaatcatcgcacccgaatcaagcccaaacacagatggaattcat
gtcggcgagagtagcaatatcctaataagagataccatcatcagaacaggagacgattgc
atatccattgtgaatggttcacgacaaatactcaccaaaaacatcgtatgtggtccaggt
catggaatcagcattggcagtttgggagctaaacacacaaaggaaagtgtgtccaatgtg
tttgtgaatgatgtcatattgaagaacacaacaaatggtattaggatcaagacatggcaa
ggcgggcaaggctacgcgaaggacatcacattccaaaacatcactatgcacaacgtcaag
aatcccataattattaaccaaaactactgcgactcgaaacttccttgtcatgaacaggat
tcagcagtggaagtgagtcacgtactctacaagaacatcaagggaaccagcgcttcgaga
gaagccatgacatttaactgcagcaacaatgtcgggtgtcaccacattgtgctgcagaac
atcgacttggtgggcgagggtggagaggttgtgacaagtgcgtgtaataatttcaaatgg
caagggattgggaagatcattcctagtctatgtgcttga
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