Zingiber officinale (ginger): 121978360
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Entry
121978360 CDS
T08725
Name
(RefSeq) pre-mRNA-splicing factor 18-like
KO
K12817
pre-mRNA-splicing factor 18
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121978360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
121978360
Spliceosome [BR:
zof03041
]
Complex C
Other components
Step II factors
121978360
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
Motif
Other DBs
NCBI-GeneID:
121978360
NCBI-ProteinID:
XP_042386650
LinkDB
All DBs
Position
4B:86163544..86164797
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AA seq
375 aa
AA seq
DB search
MDLLKRELQRKRKALEDDFGGRKLLRRSEIEHKETERLRQLEKLHRQPKSLNAAASSPPP
SSSPSKMPNDPLPRGAVDNWSAARDEVIRRLRILKHPATLFGEDDAGRLRRLQTVIESGP
IETEEELADGQTNDFLRDIHNLRREQKAGTAVAKREGGTGTAEKSPDTDTDSIMAKGNFE
DLCDEDKIQIFFTRLLGDWGQEVAEMPDAEKRTAKGKSAVATFNQCDRYLNPMFKLCRKK
ALPGDIRQALVRVAQCCQRRDYLAATDEYIKLAIGNAPWPIGVTMVGIHERSAREKICAN
SIAHVMNNETTRKYLQSVKRLMTFCQRRYPTDPSRSSEFNSLANGSDLQSLLAENRSSSA
KNMAAKERPTLVSAA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcttaagcgcgagctccagcggaagcgcaaggctctggaagatgacttcggc
ggacggaagctcctccgccgctccgagatcgagcacaaggagaccgaaagactccgccaa
ctggagaaactccaccgccagcccaaatccctcaatgctgccgcttcttccccgcctccc
tcctcgtctccctctaagatgcccaacgatcctcttccccgcggtgccgtcgacaattgg
tcggcagcgcgcgacgaggtgattcgccgccttcggattctgaagcatcccgccaccctc
ttcggggaggacgacgctggccggctccgccgtctccagacggtgatcgagtcaggcccc
atcgagaccgaggaggagttggccgatgggcagacaaacgacttcctcagggacatacat
aatctccgccgcgaacagaaggccggaacggccgtcgccaagagagaaggcggcaccggt
actgcggagaaaagccctgataccgatacggattcgattatggcgaaggggaatttcgag
gatctgtgcgatgaggacaagattcaaattttcttcacgaggctgctgggcgattggggc
caggaggtggccgaaatgcccgacgccgagaagcgcactgccaaagggaaatccgcggta
gctacgttcaaccaatgcgatcggtacttgaatccaatgttcaagctgtgccggaagaag
gctcttccgggtgacatccgtcaggccttggtcagggtggcacagtgctgccagaggcga
gactacttggccgccacagacgagtacatcaagctggcgatcggcaacgcgccgtggcct
attggcgtgaccatggtaggcattcatgaacgttctgcccgtgagaagatctgcgcaaac
agcatagcgcacgtcatgaacaacgagacaacccgcaagtacctgcaatcggtgaagagg
ctgatgacattttgccagcgccggtacccgacagatccgtccaggtcctccgagttcaac
agcctggcgaacgggagcgacctccagtccctcctggcggagaatagatcatcatcagct
aagaacatggctgccaaagagaggccgacactagtctcagctgcttga
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