Zingiber officinale (ginger): 121978403
Help
Entry
121978403 CDS
T08725
Name
(RefSeq) probable auxin efflux carrier component 1b isoform X1
KO
K13947
auxin efflux carrier family protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
121978403
Transporters [BR:
zof02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
121978403
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mem_trans
Motif
Other DBs
NCBI-GeneID:
121978403
NCBI-ProteinID:
XP_042386690
LinkDB
All DBs
Position
1B:127915755..127918470
Genome browser
AA seq
598 aa
AA seq
DB search
MISAVDLYHVLTAVVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS
TNNPYAMNYRFIAADTLQKLIVLAVLAAWAKLSVRGCLEWAITLFSLATLPNTLVMGIPL
LKGMYGPDSGSLMVQIVVLQCIIWYTLMLFLFEYRGAKLLIMEQFPDTAGSIISFHVDSD
IISLDGKEQLQTQAELGDDGKLHVTVRKSTSSRSEACSRRSFGGLNSGGISITPRPSNLS
NAEIYSLQSSRNPTPRGSSFNHADFYSMVRNSNGGTASSLSPRHSNFGGVTFDSETGTRT
NGAAMAYPTPPATGMFSPVKKANGVEGGKDLHMFVWSSSASPVSEGGMHVFGGAEFRNEH
GVALQDDHRQKEANREAYDLCRRDDFSFSNKPIGQGIDPIKKVGQNLTNAGSNSTELHSK
TVVDEVSKALMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLIWSLVSFRWEIEMPAIVA
KSISILSDAGLGMAMFSLGLFMALQPRIIACGNSLAAFAMAVRFITGPAVMAAASIVVGL
RGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgatatcggcggtggacctttaccacgtgctgacggcggtggtgccgctttacgtggcg
atgatcctggcgtacggttcggtgaagtggtggcgtatctttacccccgaccagtgctcg
gggatcaaccgcttcgtggcactcttcgccgtgccgctgctctccttccacttcatctcg
accaacaacccctacgccatgaactaccgcttcatcgcggcagacacgctgcagaagctg
atcgtgctggccgtgctggcggcatgggcgaagttgagcgtccgcggctgtctcgagtgg
gccatcacgctcttctccctcgccacgctccccaacacgctggtgatgggcattcccctc
ctcaaaggaatgtacggacccgattccggcagtctcatggtccagatcgtcgttcttcag
tgcatcatctggtacaccctcatgctcttcctcttcgagtacaggggcgccaagctcctc
atcatggagcagttcccggacacggccggctccatcatctccttccacgtcgactccgac
atcatctccctcgacgggaaagagcagctgcagacccaggcggagctcggtgacgacggg
aagctccacgtgacggtgcgcaagtcgactagctcgcgctccgaggcctgctcgcggcgc
tccttcggcggactcaactccggcggcatctccatcactccgcgcccctccaacctctcc
aacgcggagatttactcgctgcagtcgtctcgcaacccgacgccgaggggctccagcttc
aaccacgccgacttctactcgatggtcaggaacagcaacggcggaacggcgagcagcttg
agcccgcggcactccaacttcggcggcgtgacattcgactcggagacagggaccaggacc
aacggcgctgccatggcgtacccgactccacccgcgacaggaatgttctcgccagtgaag
aaggcgaatggtgtagaaggaggtaaggatttgcatatgttcgtgtggagttcgagcgcg
tcacctgtctcagaaggagggatgcatgtgttcggcggggcagagttccggaatgagcat
ggcgttgctctgcaagatgatcaccgccagaaagaagccaatcgtgaagcctatgatctg
tgtcgacgagatgacttcagtttcagcaacaaacccatcgggcagggaattgatcccatc
aagaaggtcgggcagaacctcacaaatgcaggttctaattcaacagagctccactcgaaa
acggtggtcgatgaagtctcaaaggccttgatgccgcctgcgagtgtgatgaccagactt
atactgatcatggtctggcgaaaactaatccgaaaccccaacacctactcgagccttctt
gggctcatctggtctcttgtctccttcaggtgggaaattgaaatgcctgctatcgttgca
aagtcgatctcgatactttctgatgcagggcttgggatggccatgttcagtctcggtttg
tttatggcattacagccgagaattatagcttgtggcaattctctagctgcattcgccatg
gctgtcagattcatcaccggccctgctgtcatggctgctgcttctattgtagtcgggttg
cgaggagtcctgttacacgttgcgatcgtacaggcagctcttccccaagggattgtgcca
tttgtgtttgcaaaggagtataatgtgcatcctgatattttaagcacgggggttatattt
gggatgctgattgctctccccattactttagtttactacattttactggggctttga
DBGET
integrated database retrieval system
