Zingiber officinale (ginger): 121978475
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Entry
121978475 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121978475
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
121978475
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121978475
03036 Chromosome and associated proteins [BR:
zof03036
]
121978475
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121978475
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121978475
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121978475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Colicin-DNase
Motif
Other DBs
NCBI-GeneID:
121978475
NCBI-ProteinID:
XP_042386754
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All DBs
Position
1B:complement(128457256..128461127)
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AA seq
501 aa
AA seq
DB search
MWKQFLSKLPRKSSKSDSSPAQACLNGNPIRWTRSGNVVPSRSSTVKRTASAIFPSSVVT
SIEPLLLFKDVPHTEKKNLFISKLNLCCVVFDFSDPDKNTAEKDMKRQTLLDLIEYVDAG
SSRFTESMISASCKMFASNLFRAFPPNIRSSSVGGEAEEEKPMFEPAWSHLQLVYDLLLK
FIESSSLDAKIGKKYVDHSFILRLLHLFDSEDPRERECLKAILHRIYGKFMVHRPFIREV
VSNIFCQFVFETERHNGIAELLEVFGSIISGFALPLKEEHKLFLWKVIIPLHKPKTIGIY
LQQLTYCVAQFVEKEPKLATSVVNGLLRYWPVTNSQKEVMFLSELEEILEITNEVEIQEC
MLPLFRRIAYCINSFHFQVAERALFMWNNDHLISLVSHNRQTIMPLILPALERNIHSHWN
QAVLNLTRNVKKLLHEMDEELFLACENNFEQEEMEQKIAEEKRRMTWHRLENSAAFQPLA
GNTAVLIRPPLVSPVVAAARS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcaattcctaagtaaattgcctcgcaagtcttccaaatcagattcttcccct
gcgcaggcgtgtttaaacgggaatccaatccgttggaccagaagcggcaatgtagttccc
tctcgatcaagcacggtcaagcgaactgcttccgccatattcccgtcaagtgttgtcaca
agcattgaaccgctacttctattcaaagatgtacctcacacggaaaagaagaaccttttc
atcagtaagttaaatctctgttgtgtagtcttcgatttctctgatcccgacaagaacact
gctgagaaggatatgaaacggcagacactattagatctcattgaatatgttgatgctggg
agctctcgtttcactgagtccatgatttctgctagctgtaagatgtttgctagtaacttg
tttagggccttcccaccaaatatacgatctagttctgttggtggggaggctgaagaggaa
aaacctatgtttgaaccagcttggtcccaccttcaacttgtctacgatttgctgcttaag
ttcatagaatcctcctcacttgatgctaagatcgggaagaagtatgtagatcattcattc
attttgagactacttcacctctttgattctgaggatcctagagaaagggaatgcctgaaa
gcaatattgcacaggatctatggaaaattcatggtgcatcgtccttttatccgggaagtg
gtaagcaacatattttgtcagtttgtgtttgagaccgagcgacataatgggattgctgag
ttgttagaagtctttggtagtatcatcagtgggtttgcattgcctctaaaagaggagcat
aaactgttcttgtggaaggtcattatacctctgcacaaaccaaaaacgattggcatatat
ctccaacagctgacttactgtgtggcgcagtttgtggagaaagagcctaaactggcaacc
tcagttgtcaatgggttgctgagatattggcctgtaaccaatagtcagaaggaagtaatg
tttttaagtgagttggaggagatcttagagattactaacgaagtggagattcaggagtgt
atgcttccattattccgaaggattgcatactgtattaacagcttccatttccaggtggca
gagagggccttattcatgtggaacaatgatcacttgattagtctggtgtcgcacaaccgg
caaacaataatgcctctaattttgcctgccttggaaaggaacattcatagtcactggaat
caagcggttttgaacttgacgcgaaatgtgaagaagctgttacatgagatggatgaggag
ctatttttagcttgcgagaataattttgaacaggaggaaatggagcaaaagatcgcggag
gagaagcgaagaatgacctggcaccgcttggagaactccgctgccttccagccactggcc
ggaaacacggctgtcctgattagacctccacttgtttcaccagttgttgctgctgcccgt
tcttga
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