Zingiber officinale (ginger): 121979209
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Entry
121979209 CDS
T08725
Name
(RefSeq) AMSH-like ubiquitin thioesterase 2
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121979209
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
121979209
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121979209
04121 Ubiquitin system [BR:
zof04121
]
121979209
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121979209
Peptidases and inhibitors [BR:
zof01002
]
Metallo peptidases
Family M67
121979209
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Others
Others
121979209
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
121979209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
OrfB_IS605
Motif
Other DBs
NCBI-GeneID:
121979209
NCBI-ProteinID:
XP_042387088
LinkDB
All DBs
Position
5A:complement(659411..666123)
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AA seq
377 aa
AA seq
DB search
MLPSVDDRFPVSFYFRIADQLLKQADVYRKEGNLDCLHLTLNRYVRLVSQVIPQHRNYSK
HSSKEKLRHTKILQESTKEAEKLKLLATTNINSSGSQLGRRSKNSANNFRSTSQRWTKKI
LNFSSFKEGKIGHYDSRTCQRGDDNEVHVVKHYFPSSVVSWVEEGGSSGQVSHVIFPSSN
DGNSKCISEGSSTSDSTKDMHISVKLTEEFLDLAKENTHRDLETCGILGAFLKNHTFYIT
TLIIPKQESTSNSCQALNEEEIYAILDERSLYPAGWIHTHPSQTCFLSSIDLHTQYSYQV
MLPEAIAIVLAPTDPSKGCGIFRLTDPGGIAVLKECNERDFHPHSTTADSSPIYEICSNI
YTNSNLRFEIIDLRISS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttgccctcggtggatgatcgattccccgtatccttctacttcagaatcgccgaccaa
ctgttgaagcaggctgatgtttatcggaaagaagggaatttagactgtcttcaccttact
cttaaccgttacgtcaggttggtgtcccaggtgattccgcagcatcggaattactccaag
cactcatcaaaggaaaaacttcgtcatacgaaaattctgcaagagtcgaccaaagaggct
gaaaagttgaagttattagctacgactaacatcaattcaagtggttcgcagctaggtagg
agatctaagaatagcgcaaataacttcagatcaacatcgcaaaggtggaccaagaagatt
ttgaacttttctagcttcaaggaagggaagattggacattacgattcaagaacatgtcaa
agaggtgatgacaatgaagttcatgttgtgaagcactactttccttcttctgttgtttct
tgggtagaggagggaggttcttctgggcaagtttctcatgttatttttcccagttcaaac
gatggtaattcaaaatgtatatctgaaggatcttcaacttcagactctactaaggatatg
catatatcagtgaaattgactgaagaatttttggatcttgctaaagaaaacacacatagg
gacttagagacttgcggcattcttggtgcttttcttaagaatcacactttctacattaca
acactaataataccaaagcaggagtcaacttccaattcatgccaggcattaaatgaggaa
gaaatttatgccatattggatgagaggtctctttatcctgcaggatggattcatacacac
ccttcacaaacttgctttctgtcatcgatagatttgcatactcagtactcataccaggtc
atgctacccgaggcaatagcaatcgtcttggcaccaacagatccttcaaagggatgcgga
atatttcgtctgaccgatcccggaggaatcgctgttctgaaagaatgcaacgagagggat
ttccatcctcactctaccaccgccgacagtagtccgatctacgagatctgctccaatatt
tatacaaattcaaacctgcggttcgagatcatcgacctccgaatctcgtcctga
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