Zingiber officinale (ginger): 121979221
Help
Entry
121979221 CDS
T08725
Name
(RefSeq) myosin-17-like isoform X1
KO
K10357
myosin V
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121979221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121979221
04131 Membrane trafficking [BR:
zof04131
]
121979221
03029 Mitochondrial biogenesis [BR:
zof03029
]
121979221
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
121979221
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121979221
mRNA cycle factors
P-body specific factors
121979221
Membrane trafficking [BR:
zof04131
]
Others
Actin-binding proteins
Myosins
121979221
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121979221
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121979221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Med19
TSC22
Zeta_toxin
AAA_22
nSTAND3
AAA_18
ABC_tran
BBS2_hp
Motif
Other DBs
NCBI-GeneID:
121979221
NCBI-ProteinID:
XP_042387105
LinkDB
All DBs
Position
5A:875592..895486
Genome browser
AA seq
1522 aa
AA seq
DB search
MASPDNIIVGSHVWIEDPGVAWIDGEVFQISGHKVHVRTTNGKMVVANISKAFPKDTETP
PGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQY
KGATFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKLLMRYLAYLGGRT
GIEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLE
RSRVCQINDPERNYHCFYLLCAAPHEDIKKYKLGSPSSFHYLNQSKCVKLDGVDDAEEYI
AIRRAMDIVGISEQEQEAIFRVVAAILHLGNVDFAKGPEIDSSAIKDEKSRFHLNMTAQL
LMCDAGSLENALIKRVMVTPEEIITRTLDPASAIVSRDGLAKTIYSRLFDWLVEKINVSI
GQDPDSKHLIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEID
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKTNKRFVKPKL
SRTDFTICHYAGEVTYQANHFLDKNKDYVVAEHQDLLNASTCPFVSGLFPPLPEETSKSS
KFSSIGSRFKLQLQALMETLSSMQPHYIRCVKPNNVLKPAIFENFNVIQQLRCGGVLEAI
RISCAGYPTRRSYYEFFHRFALLALEFMEENYDDKIACLKILDKMGLKGYQLGKSKVFLR
AGQMAELDARRAEVLGRAARTIQRQTRTYIARKEFLVLREATIQLQTFCRGQLACKLFEQ
MRREAAALKIQKNYHCYIARKSYLALKTSAVTLQTGLRAMSAHTVFRLKKQTKAAICIQS
CCRSHRDYLYYKRLQKATLTYQCAWRQRLARRELRKLKMAARETGALKEAKDKLEKRVEE
LTWRLQLEKRLRTDLEESKVQEVAKLHSVLSEVQLELEEAKSMLTRERDAARKVIEEAPP
VIKETTILVQDMEKINSLTAQVERLKDLLQTEKLESSAAKKAYSEAQEKNNELIKKVENA
ETNVNQLQDSIRRLEDKVSNLASENQVLRQQALSISPTSRALVMHPKATIFPRTPENNNV
LHGETKLALDWSPALPNPKNLEIDEKPQKSLSEKQQESQNLLLKCISEELGFSKSRPVAA
CLVYKCLREWRSFEVERTGIFDQIIQAIGSKLEDNINVLSYWLSNTSTLLLLLQRTLKAG
GMGSFTPHRRRTSVPVFGRMSQGIRASPHSAGPLSLNGRMVGGSNDLHQVEAKYPALLFK
QQLTAFLEKIYGMIRDNLKKEISSVLGSCIQAPRTSRASLVKGIRSPGNAAAQQALMGHW
QSIVTSLTNYMKPLKANYVPPFLVRKLFTQIFAFINIQLFNSLLLRRECCSFSNGEYIKS
GLTELERWCSDATEEYAGSSWDELKHIRQAVGFLVLHQKPKKALKEITQDLCPVLSIQQL
YRISTMYWDDKYGTRSVSSEIISSMRLMMTQDSSSNSFLLDDDSSIPFSVDDVSKSMTEI
DIADIDPPPFIRQNSGFAFLAQ
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcccagacaatattattgtaggttctcatgtgtggattgaagatccaggtgtg
gcttggattgatggtgaggtatttcagattagtggtcacaaggtccatgtgcgcacaact
aatggaaaaatggtcgtggcaaatatctcgaaggcatttcctaaagatacagaaactcca
cctggaggagtagatgacatgacaaaattatcatatctgcatgaacctggggttttgcaa
aacctggccacacgctatgagcttaacgaaatctatacatacactggtaatatcctgatt
gcagtgaacccatttcaaaggttgccgcatctatatgacacccatatgatggaacaatac
aaaggagcaacatttggggagctgagtccccatgtttttgctgttgctgatgttgcttat
agggcaatgattaatgaaggaaaaagtaactccatcttggtcagtggtgaaagtggtgct
ggtaaaactgaaacaacaaaactgcttatgagatatctggcatatttaggtggacggaca
ggaattgaaggacggactgtcgaacaacaagttttggagtccaatccagttcttgaggct
tttgggaatgcaaaaactgttcggaacaacaactctagtcgttttggtaagtttgttgag
atccaatttgacaaaaatgggagaatatctggcgctgctattagaacctacttgcttgaa
agatctcgtgtctgccaaattaatgatcctgagagaaactatcactgcttttaccttcta
tgcgctgctcctcatgaggatatcaaaaagtataaattgggaagcccaagctcattccac
tatctaaatcagtccaaatgtgttaaattggatggtgtagatgatgctgaagagtatatt
gcaattagaagggctatggatatagttggaataagtgagcaagaacaggaggcaatcttc
agggttgttgctgctatactccatcttggtaatgttgattttgcaaagggaccagagata
gattcatctgctatcaaggatgagaagtcaagattccatctaaacatgacagctcaactc
ctaatgtgtgatgccggaagtctagaaaatgctttgattaaacgtgtcatggtgacacct
gaagaaattattaccagaactcttgatcctgcttctgcaattgttagccgagatgggtta
gcaaaaaccatttattctcgcttatttgattggttggtcgaaaaaattaatgtatcaatt
ggacaggacccagattcaaaacatttgatcggagtacttgatatttatggttttgagagt
ttcaaatgtaatagttttgaacagttctgcatcaattttacaaatgaaaaactgcaacaa
catttcaatcagcatgttttcaaaatggagcaagaggagtataccaaggaggaaattgac
tggagctacattgaatttgttgataaccaagatgttctcgacttgattgagaagaaaccc
ggtggtatcattgcccttcttgatgaagcttgtatgtttcccaagtctacacatgagaca
tttgcccagaagttgtatcagacatttaaaaccaacaagagatttgtcaaaccaaagctt
tctcgtacagattttacaatctgccattatgcaggcgaggtaacatatcaagccaatcat
ttcttagacaaaaacaaagattatgtggtggcagaacatcaggatttactcaatgcttca
acatgtccctttgtgtcgggtttattccctccacttcctgaagaaacatctaagtcatcc
aagttctcttctattggatcacggtttaaattacaacttcaagctctgatggaaactttg
agctctatgcaaccacattatattaggtgtgtgaagccaaataatgttctcaaacctgct
atctttgagaacttcaatgttatccagcaattgcgatgtggaggagttcttgaagcaatc
aggataagctgtgctggttatcctacccgaagatcatattatgaattttttcatcgattt
gctcttcttgcactagaattcatggaagagaattatgatgacaagattgcctgtctaaag
attttggataaaatgggattgaaaggttaccaactaggcaagagcaaggtgtttttgaga
gccggccagatggctgaactggatgctcgaagggcagaagtattaggaagagcagccaga
accatacagagacaaactcggacatatattgctcgcaaggaattccttgtgctacgggaa
gcaactattcaattgcaaactttctgtcgaggacaattggcttgtaagttgtttgagcaa
atgaggcgtgaagcagcagcactcaaaattcagaaaaattaccattgttacattgcaaga
aaatcatatttagctcttaaaacttcagcagttacattgcaaacaggcttaagggcaatg
tctgctcacacagtgtttaggttaaaaaaacaaactaaagcagcaatctgcattcagtct
tgttgccgtagtcatagagactatttatattacaagagattgcagaaggccacacttacc
tatcaatgtgcatggagacaaaggcttgctagaagagagctgagaaaactaaaaatggct
gccagggaaacaggagctctgaaagaggcaaaagacaagcttgagaagcgggttgaggag
ttaacttggcgtttacagttggagaaacgtctaagaactgatctggaagagtcaaaagtg
caagaagtggccaagttacattctgtgttgtctgaggtgcaactagaacttgaagaggcc
aagtcaatgcttactcgggagcgtgatgccgcacgaaaagttattgaagaagcacctcct
gttattaaagagaccactatcctggttcaagacatggaaaaaatcaactcattgacagct
caagttgaacggttgaaggatttattgcaaacagaaaagctggaaagtagtgcagccaag
aaagcttacagcgaggcacaagaaaaaaataatgaactcattaagaaagttgaaaatgct
gaaacaaatgttaatcagcttcaagatagtattcggaggcttgaagataaagtatcaaat
ctggcatcggagaatcaagtgcttcgccagcaagcactttccatatcaccaactagcaga
gcattggttatgcatccaaaagcaactatcttccctagaacgccagagaataacaatgtt
ctgcatggagaaacaaaacttgcattggattggagtcctgcattaccaaatcccaagaat
cttgaaattgatgaaaaaccacaaaagtcactgagtgagaagcagcaggaaagtcagaac
ttgcttcttaagtgcatctctgaagagctaggattctccaagagtagacctgttgctgct
tgtcttgtatataaatgtctccgcgagtggagatcttttgaagttgaaaggactggtatt
tttgatcaaataatccaagcaataggttcaaaacttgaggataacatcaatgtattatct
tactggttgtccaatacatctaccctattgctgcttctacaacgcacactgaaagcaggt
ggcatgggaagttttactcctcataggcggagaacatcggttcctgtatttggaaggatg
tctcaaggaattcgagcatctcctcatagtgctgggcctctttccctgaatggtcgcatg
gttggtggatcaaatgacttgcaccaagtcgaagctaaatatccagctttgcttttcaag
caacaacttactgcatttcttgagaaaatttatggaatgataagggacaacttaaagaaa
gagatatcttctgtccttggctcttgtatacaggctccaaggacatcccgtgcaagctta
gtcaaaggaatacgttcaccaggaaatgcggcggcccaacaagcccttatgggacattgg
caaagtattgtgacgagtttaacaaactacatgaaaccacttaaagctaattatgtccct
ccattcctagttcggaagttgtttacccaaatatttgctttcatcaacattcaactattc
aatagtcttcttctgaggcgtgagtgctgctcgtttagcaatggggaatatattaaatca
ggacttactgaattagaacgttggtgcagtgatgcaactgaagagtatgcaggttcttca
tgggatgagttaaaacatattaggcaggctgttggattcctggttttacatcagaaacca
aagaaggcactgaaggagataactcaagatttatgcccagttcttagcatacaacagtta
tacagaatcagtactatgtactgggatgacaaatatggcacacgcagtgtttcatcagag
attatttcaagtatgagacttatgatgacccaggattcttccagtaattctttcttgtta
gatgatgactccagcattccattttcggtagacgatgtctcaaagtcgatgacagaaata
gatatagcagatattgatccaccgcctttcattcgccaaaattcaggcttcgcatttctg
gcacaatga
DBGET
integrated database retrieval system
