Zingiber officinale (ginger): 121979224
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Entry
121979224 CDS
T08725
Name
(RefSeq) importin subunit beta-1-like
KO
K14293
importin subunit beta-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121979224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
121979224
03036 Chromosome and associated proteins [BR:
zof03036
]
121979224
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121979224
Pre-60S particles
121979224
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121979224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_2
IBN_N
TOR1L1_N
Vac14_Fab1_bd
HEAT_Maestro
MMS19_C
PDS5
GNC1_N
MMS19_N
Xpo1
Proteasom_PSMB
INTS7_N
UTP20_N
Sec7-like_HDS
DUF577
Motif
Other DBs
NCBI-GeneID:
121979224
NCBI-ProteinID:
XP_042387112
LinkDB
All DBs
Position
5A:complement(911563..916214)
Genome browser
AA seq
868 aa
AA seq
DB search
MEVTQILLNAQAVDAAVRKHAEESLKQFEEQNLPVFLLSLSNELANHEKPVDSRKLAGLI
LKNALDSKEQLRKTELVQRWLSLDVSVKSQVKSCLLQTLSSPVPDARSTASQVIAKIAGI
ELPQKQWPELITSLLSNIHQLQPHVKQATLETLGYICEEVSPQVVDQDQVNKILTAVVQG
MNASEGSADVRLAATRALYNALGFSQTNFSNDMERDYIMRVVCEATLSPDVKIRQAAFEC
LVAISSTYYDKLASYMQDIFNITSKAVREDEEPVGLQAIEFWSSICDEEIDILDEYGGDF
TADSDVPCYYFIKQALPALVPMLLETLLKQEEDQDQDEGAWNLAMAGGTCLGLVARTVGD
DIVPLVMPFIQENITKPEWRQREAATYAFGSILEGPSPDKLIPVVNVALNFMLTALMKDP
NNHVKDTTAWTLGRIFEFLHGSTLETSVITNENCQQILTVLLQSMKDVPNVAEKACGALY
FLAQGYEDSPGSPLSPYFQDIIQSLLNVTHRDDAGESRLRTAAYETLNEVVRTSTDETAP
VVTQLLPVIMLELHQTLETQKLSSDDREKQNELQGLLCGCLQVIIQKLGASETTKYAFMQ
YADQIMELFLRVFACRNATVHEEAMLAIGAVAYAVGGNFLKYMQGFYPYLEMGLQNFQEY
QVCAITVGVVGDLCRALEEKILPYCDGIMTQLLKNLSSSQLHRSVKPPIFSCLGDIALAI
GENFEKYLIYSMPMLQSAAELSSHAVATDNEMLDYANQLRNGILEAYSGILQGFKNCPKA
QLLVPYVPHILQFLDKLYNEKDMDDAVMKTAVGVLGDLADTLGTHASTLMNQSVASIEFL
EECLSSDDPSIKESAEWAKMAISRAVSV
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcactcagattctgttgaatgcacaagcagtggatgctgctgtgcggaaacat
gcagaagaaagtctgaaacagttcgaggaacaaaatcttcctgtttttcttctatctctc
tctaatgagttagcaaaccatgagaagcctgttgatagccgaaaattggcaggattgata
cttaaaaatgctttggattcaaaggaacagcttaggaaaactgagcttgttcagagatgg
ttgtctttagatgtatctgtcaaatcccaggtcaagtcttgcttgctgcagaccctttct
tctccagtacctgatgctaggtctactgcatcccaagttattgctaagattgctggtatt
gaactacctcagaaacaatggcctgaacttataacttctctactctcgaacatacatcag
cttcagccacatgttaagcaggctacattggaaacgcttggctatatatgtgaggaagtt
tctccacaagtagttgatcaagaccaggtcaacaagatacttacggctgtagttcaggga
atgaatgcttcagagggaagtgcagatgtgaggcttgctgctacaagagcattgtataat
gctttgggattttcacaaacaaatttctcaaatgatatggaacgtgactatattatgaga
gtggtctgtgaagctactttgtctccagatgtgaagatccgacaagctgcatttgagtgt
ttagtagctatctcgtctacctactatgacaaacttgcatcatatatgcaggacatattc
aatatcacttcaaaggctgtcagagaagacgaggagcctgttggtctccaagcaatagag
ttctggagctccatctgcgatgaggaaatcgacatcttagatgagtatggcggtgatttt
actgctgattctgatgtgccttgctattattttatcaagcaagctctgcctgctttggtt
cccatgttactagagacacttcttaaacaagaagaggatcaagaccaggatgaaggagct
tggaacctcgcaatggctggaggaacttgtttgggtttggttgcacgcacagttggggat
gacatagtacctcttgtgatgcctttcattcaggaaaacataacaaaaccagagtggagg
cagagagaagctgcaacttatgcctttggttcaattctggagggtccatcaccggacaag
ctcattcccgttgtcaatgttgctctaaactttatgctcactgccttgatgaaagatcca
aataaccatgtgaaagacactactgcttggacactgggaagaatatttgaatttctacat
ggatccactttagagacttctgtcataactaatgagaattgccagcaaatacttactgtc
ctccttcagagcatgaaggatgttcctaatgttgctgaaaaagcctgtggtgcactttac
tttcttgcccaaggttatgaagatagtccaggatcaccactgtccccttacttccaagat
ataattcagtccctccttaatgtcacacacagggatgatgctggggaatcccgcttgagg
acggcagcttatgagaccctgaatgaagttgtgagaacgtcaactgatgagactgcccca
gttgtgactcagttgctcccagttataatgttggagctccaccaaactcttgagacccag
aagctgtcttcagatgaccgagagaagcagaatgaactgcagggccttctttgcggatgc
ttgcaggttataatccagaagttgggagcatctgagacaacgaagtatgcttttatgcag
tatgctgaccagataatggaactttttctccgtgtgtttgcttgccgaaatgctacagta
catgaagaggcaatgcttgcaattggtgctgttgcatatgcagtcgggggaaatttccta
aagtacatgcaaggcttttatccgtatttggaaatgggacttcaaaactttcaggagtat
caggtgtgtgctatcactgttggagtagttggagatctatgcagggcattggaggagaag
atactaccatactgtgatggaatcatgacacaattattgaagaatctgtctagtagtcag
ttgcacagatctgttaagcccccaatattttcgtgtttgggtgatattgcattagcaatc
ggggaaaactttgagaaatacctaatctattccatgcctatgctacagagtgcagcagaa
ctgtcatcgcatgctgttgcaactgacaatgaaatgctggattacgccaatcaacttaga
aatgggatcctggaagcatactctggtatattgcaaggatttaaaaactgtccaaaggcc
caacttctggtgccttatgtgccccacatccttcaattccttgataaactatacaatgaa
aaggacatggatgatgctgttatgaagactgcagtaggcgtccttggtgatttagccgac
accctcggtacccatgctagtacattgatgaaccagtctgttgcaagcattgagttcctg
gaagaatgtctatcctcagatgatccatccataaaagagtctgctgaatgggctaagatg
gccattagtcgagcggtctctgtttga
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