Zingiber officinale (ginger): 121979251
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Entry
121979251 CDS
T08725
Name
(RefSeq) guanine nucleotide-binding protein subunit beta-like protein A
KO
K14753
guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
121979251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121979251
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121979251
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121979251
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121979251
Exosomal proteins of colorectal cancer cells
121979251
Exosomal proteins of bladder cancer cells
121979251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
PROPPIN
Beta-prop_WDR75_2nd
Beta-prop_NWD2_C
eIF2A
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_RSE1_2nd
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
121979251
NCBI-ProteinID:
XP_042387145
LinkDB
All DBs
Position
5A:complement(1511867..1515188)
Genome browser
AA seq
324 aa
AA seq
DB search
MADTLVLRGTMRGHSDVVTAIAAPIDNSDMIVSSSRDNSILVWHLTKDAPAASLEGAGGG
SSYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGDLRLWDLATGLTTRRFCGHTKDVL
SVAFSVDNRQIVSASRDRTIKLWNTLGECKYTIQDADAHTNWVSCVRFSPNASQPTIVSG
SWDRTVKVWNLTNCKLRCTLAGHGGYVNTVAVSPDGSLCASGGKDGVTLLWDLAEGKRLY
SLDAGAIIHSLCFSPNRYWLCAATQESVKIWDLESKSVVQDLKPETTSTKNQMLYCTSLT
WSADGSTLFTGYTDGTIRVWEIRY
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaccctggtccttcgcggcacgatgcgtggccactcagacgtggtcacagca
atcgccgctcccattgacaactccgacatgatcgtctcctcttcccgggacaactccatc
ctcgtctggcacctcaccaaggacgcccccgccgccagccttgagggtgccggagggggt
tcttcctatggtgtgccccggcgtcgcctcaccggccactcccactttgttcaggatgtg
gtcctctcttccgatggccagtttgccctgtctggctcctgggatggagaccttcgcctc
tgggacctcgcaactggcctcaccacccgccgcttctgtggtcacaccaaggacgtcctc
tccgtcgccttctccgtcgacaatcgccagatcgtgtcggcctcccgtgaccgcaccatc
aagctttggaatactcttggggagtgtaagtacaccattcaggatgccgatgcacacact
aactgggtcagctgcgtccgcttcagtcccaatgcttcacagcccaccatcgtctctggc
tcatgggaccgcactgtgaaagtctggaacttgacgaactgcaaactgcgatgcactctt
gctggccatggtggctacgtcaacacagttgccgttagccccgatggttccctctgtgct
agtggtggcaaagatggagtcacgcttctctgggatttagctgaggggaaacgcctttat
tcccttgatgcaggggccatcattcactcgctttgcttcagccccaaccgttattggctt
tgtgccgccactcaggagagcgtcaagatttgggatctcgagagcaagtccgttgtgcag
gatcttaagcctgagaccacttccaccaagaaccagatgctgtactgcacaagtttgaca
tggagcgccgatggtagtactcttttcactggttacactgacggtaccatcagagtgtgg
gagatacgatactag
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