Zingiber officinale (ginger): 121979273
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Entry
121979273 CDS
T08725
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00510
N-Glycan biosynthesis
zof00513
Various types of N-glycan biosynthesis
zof01100
Metabolic pathways
zof04141
Protein processing in endoplasmic reticulum
Module
zof_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
121979273
00513 Various types of N-glycan biosynthesis
121979273
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121979273
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Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
Motif
Other DBs
NCBI-GeneID:
121979273
NCBI-ProteinID:
XP_042387173
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All DBs
Position
5A:complement(2305235..2318122)
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AA seq
693 aa
AA seq
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MVPNHGSIGLRALICALLSICAAASIRPISDAHRSAALDLFVPSGGLFQSLEETYEALRT
FQILGVGNFSDIGPATCPVIIDNLTSPASSPKDLFDAIRVNSILECQIGSQTFKDVAEKF
QDLIKSTDKLMNFYYSILGLLHVKAQGVSVVLPDAEGVFYSIKALSQNDGRWQYDSNNAE
SSTCAAGIALEALAGVVSLADIELVQSKIGTIKHDIVKLFDSINSYDDGTLYFEEKHIDG
SEYKGPLATTASVVRGASAFAAIVSEKLNIPGDKLVGIAKFLLSVGVPSSTKDLFNQIDS
LSHIENNRISIPLILSLPSTVLSLTSKDQLEVEVTTVFGSAAPPLTVNLVRASSSDVKNN
PILENQELQFDTEKNVHYLDILPLKIDIGKYTLEFEISLHDPENLNTYATGGHAHSLIFL
TGLVKVDKSQIGIYDTDSESSASMLKLDFFKDDKISLVANHLQKLHLSFQLFTPLGNTIK
PHQAFLKLRHESKVEHIFALESSSRQYKIILDFLALVEKFYYLSGRYDIELAVGDAAMEN
SFLHVLGYIDLDLPEPPERASRPPSLSVDPYARFGPKQEISHIFRAPETRPPKELSLAFL
AFTLVPLGGFVIGLLTLGVNLKSFPSSSVHALFSLLFHAGIAAILLLYVLFWLKLDLFTT
LKVLGLIGVFLIFVGHRTLSCLASTSAGKVKTN
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggtgccaaatcatggatccattgggcttcgtgctctaatctgcgcgctgctgtccatc
tgcgcggccgccagcatccggccgatctccgatgctcatagatctgctgcgcttgatttg
ttcgtccccagtggtggattgtttcagagcctagaggagacttatgaagcattaaggacg
tttcagattcttggagttggaaatttttctgacattggccctgctacatgcccagttatt
atagacaaccttacatcaccagcttcaagtcctaaggacttgtttgatgcaataagagtg
aacagtatcttagaatgccagattggttctcagacttttaaggatgttgcagaaaaattt
caagatttgataaaaagcacagacaaattgatgaacttctattactccatccttggtttg
cttcatgtcaaggctcaaggagttagtgttgtcctacctgatgctgaaggggttttctat
tcaatcaaggcgcttagccaaaatgatggaagatggcagtatgatagcaacaatgctgaa
tcaagtacttgtgctgctggtatagcacttgaggcacttgctggagttgtttcgttggct
gatatagagttggttcaatctaagattggaactattaaacatgatattgtcaagctattt
gatagcatcaatagctatgatgatggaactttatattttgaagaaaagcacatcgatggt
agtgaatacaagggtcctcttgcaacaacagcctcagttgtgcgtggtgctagtgctttt
gcagcaattgtttctgagaagctaaatattcctggtgacaaactggtgggtatagcgaag
tttcttcttagtgttggagttcccagtagcaccaaagacttattcaatcagatagattca
ctatcacacattgaaaacaacaggatctctattcctcttattctttcacttccatccaca
gtattgtctttgacttcaaaagatcagcttgaggttgaggtgactacagtttttggttca
gctgcacctccactgacagtgaatcttgtacgagcttccagttctgatgtgaagaacaac
cctatacttgaaaaccaggaattacaatttgacacagaaaagaacgttcattacttggac
atcctacctctgaaaattgacatcggaaagtatacacttgaatttgagatttcacttcat
gacccagagaatttgaatacatatgccactggagggcatgctcactcattgatttttcta
acaggattggtcaaagtagacaagtctcaaattggaatttatgatactgatagcgagtct
tctgcaagcatgttaaaattggatttcttcaaggatgacaaaatttcactagtggcaaat
catcttcagaagttgcacctaagtttccaacttttcacgcctcttggaaacaccattaag
ccacatcaggcgtttttaaagctgaggcatgaaagcaaagtagagcatatctttgcattg
gagagttcttcccgacagtataagataatactagattttcttgcactcgtcgaaaaattt
tattacctctcaggtagatatgacattgaacttgccgttggagatgcagctatggagaat
tcattcctccatgttctcggatacattgatttggacttgccagaaccacctgagagggca
tcacgtcctccatcactctctgtcgacccatacgcaagatttgggccaaagcaggagata
tcacacatattccgggccccggaaacaagaccaccaaaggagctttctcttgcatttctg
gcttttacccttgtaccacttggagggtttgtgatagggttgctaactttgggagtaaat
ttgaagagcttcccttcctcatctgtccatgccttgttctccctactctttcatgctggc
attgctgctattctactgctctacgtccttttctggttgaagttggatctcttcacaact
ctgaaggtccttggccttattggagttttcctcatctttgtgggtcataggactctctcc
tgccttgcttcaacatcagcggggaaggtgaagactaattaa
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