Zingiber officinale (ginger): 121979305
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Entry
121979305 CDS
T08725
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-2-like
KO
K03265
peptide chain release factor subunit 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121979305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121979305
03012 Translation factors [BR:
zof03012
]
121979305
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
121979305
Translation factors [BR:
zof03012
]
Eukaryotic type
Release factors
121979305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
121979305
NCBI-ProteinID:
XP_042387218
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Position
5A:4144626..4147717
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AA seq
433 aa
AA seq
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MEETDKNVQVWKVKKLIKALESARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASNIKS
RVNRQSVLAAITSAQQRLKLYNKVPSNGLVLYTGTIVTEDGKEKKVTIDFEPFKPINASL
YLCDNKFHTEALSELLQSDEKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGG
QSALRFARLRMEKRHNYVRKTAELSTQFFINPATSQLNVAGLILAGSADFKTELSQSDMF
DQRLQAKILNVADVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQNTEKYC
FGADDTLKALEMGAVETLIVWENLEINRYVLKHSSSGEIMVKHLRKDEETDQNNFLDSNT
SAELEVQEKISLLEWFANEYKRFGCTLEFVTDRSQEGSQFCRGFGGIGGILRYQLDLSVF
DEISDGEYEEDFE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaacagataagaacgtacaggtctggaaggtcaagaagttaatcaaagctcta
gaatcagccagaggtaatggcactagcatgatttctctaattatgccacctcgtgatcaa
gtgtctcgagtcactaagatgttgggtgatgaatatggaactgcttcgaatatcaaaagc
agagtcaatcgacaatctgtattagctgctattacttctgctcagcaaagactcaagctt
tacaacaaggttccttcaaatggactagttttgtacacgggaaccatagttactgaggat
gggaaagaaaagaaagtcacaattgatttcgagccatttaaacctatcaatgcatctctt
tatctctgtgataacaagtttcatactgaggcattgagtgaacttttacaatctgatgag
aagttcggtttcattgttatggatggaaatggtacactgtttggcactttaagtggaaac
acgcgcgaggtgcttcataagttcactgttgaccttccaaaaaagcatggacgaggaggg
caatcagcactgcggtttgctcgacttaggatggagaagcgccataattatgtccgcaag
actgcagagctgtcaacacagttctttatcaatcctgccactagtcagctaaatgttgct
ggattaattttggctggatctgctgattttaagacagagttgagccaatctgacatgttt
gatcaacgattgcaggctaaaattctcaatgtggcggatgtgtcatatggaggtgagaat
ggttttaaccaagccatcgagctatctgctgagattctatcaaatgtgaagttcatacag
gaaaagaaattgataggtaaatattttgaggaaataagtcaaaacacagaaaagtattgc
tttggtgcggacgacaccttgaaagccctggaaatgggtgctgttgagacactaatcgtg
tgggaaaatttggaaataaatagatatgttctcaagcacagttctagtggagagatcatg
gtcaaacatcttagaaaggacgaagagacggatcaaaataactttctagattccaacaca
tctgctgagttggaagtgcaggagaaaatttcacttctggagtggtttgccaacgagtac
aagcgttttggatgcacgcttgaattcgtcactgacaggtctcaagagggatcccagttt
tgccgaggctttggtggtattggcggaattcttcgctatcagcttgacttgagtgttttt
gatgagatatctgatggagaatatgaagaagattttgaatag
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