Zingiber officinale (ginger): 121979339
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Entry
121979339 CDS
T08725
Name
(RefSeq) E3 ubiquitin protein ligase DRIP2-like
KO
K16277
E3 ubiquitin-protein ligase DRIP [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121979339
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121979339
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121979339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-RING_5
RAWUL
zf-Nse
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
121979339
NCBI-ProteinID:
XP_042387251
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Position
1B:130631303..130642586
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AA seq
435 aa
AA seq
DB search
MASSGTEEDETSAVGPVQMVKVKRKLLAACMTCPICNKLIRDATTISECLHTFCRKCIFE
KLDEEETDCCPVCNIHLGCLPVEKLRADHNLQDLRAKIFPIKKSKVGASDSAPSVTLPVR
RKEISLSSLVVNTPRVTIQTGPSGRRKKTVGNRGAATHHGSESYKNEDDTTDKFAMQSSL
NGNSTKHALNRRQAAFDPDNSNNDVNKDTGNSATAIPDKAELWKPLNCLVEAANRTKSFR
STPQNSFIKAEQKEVPDGEISTNKTRIMEHIHKSKSQDEKNHAAMTIKARRLKSVSQKRR
NIANSSQTIHDASNTQSDKRTTPFWFSLVSSFDQSGGSSFPQISTNYLRIKDGNIPVSYI
QKYLVKKLNLFNEDEVEITCRNEPVMPTMSLNNVVAQWLRGTPPSQRLPAVIGTSAKDFI
VMLGYRPHPAEVAAQ
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcaagctcggggacggaggaggacgagacgtcggcggtcggaccggtccagatggtg
aaggtgaagaggaagcttctggccgcgtgcatgacgtgccccatctgcaacaagctcatc
cgggacgccaccaccatctccgagtgccttcatacgttttgcaggaagtgcatatttgag
aagctcgacgaagaagagacagattgttgccctgtatgcaatattcatcttggttgtctc
cctgtagaaaaactcagggctgatcataatctccaagatttgagagcgaaaatatttcct
ataaagaaatcaaaagttggagcatctgatagtgccccttccgtgacattacctgttaga
agaaaagaaatttctctttcttcattagtggtgaacactccaagagttactatacaaaca
ggtccatcaggaaggcgaaaaaaaacagttggcaataggggggctgctacacatcatggt
agtgaatcctataaaaatgaggatgatactactgataagtttgcaatgcaatcaagtttg
aatggaaactcaaccaaacatgccctaaacagaagacaggctgctttcgatcctgacaat
tccaacaatgatgttaataaagatacaggaaatagtgcaactgccataccggacaaggca
gagctctggaaacctttgaattgcttagtcgaagctgcaaacagaacaaaatcttttagg
tctactccacagaattctttcatcaaggcagagcaaaaagaggttcctgatggtgaaata
agtactaacaagaccaggattatggagcatattcataagtccaaatctcaggatgagaag
aatcacgctgctatgacaataaaagcccgaaggttgaagtcagttagccagaaaaggaga
aacattgccaactccagtcaaacaatacatgatgcttctaacactcaaagtgataagaga
acaactccattttggttttccttggtttcctcttttgaccagagtggaggttcatcattt
ccccagatctcaaccaattatttgagaataaaagatggtaatatacccgtttcttacatt
cagaagtaccttgtcaagaagcttaatcttttcaatgaagatgaggtcgaaataacatgt
cgaaatgaaccagtgatgcccacaatgtcgctgaacaatgtggtagcacaatggctgcgg
gggacacctccatcacaaaggcttccggcagttattggaacctcagccaaagactttata
gtgatgttgggttaccggccacaccctgctgaagtcgcagctcaataa
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