Zingiber officinale (ginger): 121979341
Help
Entry
121979341 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
zof04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121979341
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121979341
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
121979341
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121979341
03036 Chromosome and associated proteins [BR:
zof03036
]
121979341
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121979341
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121979341
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121979341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
121979341
NCBI-ProteinID:
XP_042387252
LinkDB
All DBs
Position
5A:complement(4973517..4977292)
Genome browser
AA seq
509 aa
AA seq
DB search
MWKQFLSRLPRKSSKSDASPRSSHGQSGSDVTTSANGNPIQRTSSGNVVASRSTTVKRTA
SSIFPSSVVTSIDPLLLFKDVSDTEKQNLFVSKLNLCCVVFDFSDPNKNSAEKDKKRQAL
LDIIDYVDSEGSCFTEPIISSSCKMFASNLFRAFPPNTRSSSGGGETEEQEPTFEPAWSH
LQLVYDLFLKFLESSSLDAKIAKKYVHHSFIVRLLHLFDSEDPRERDCLKAILHRIYGKF
MAHRPFIRKAVSNIFYQFVFETNRHNGIAELLEVFGSVISGFALPLKEEHKLFLWRVLIP
LHKPKGLGVYHQQLTYCVTQFVEKEPKLIIAVINGLLRYWPVTNSQKEIMFLSELEEILE
ATNEVDIQKCMLPLFQRIGYCINSPHFQVAERALLMWNNDRVISLVSQNWQSVMPLILPA
LERNIRSHWNQAVLNLTQNIKKLLYEMDEELFLACKKKFEEEEVKQDLMEKGRMTWEHLE
STAAFQPATRNVAVQVRPVIAPPVVAALS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcaattcctaagtagattacctcgaaagtcttccaaatctgatgcttcccct
cgctcctcccatggccaatccggcagcgatgtgacgacgtctgcgaacgggaacccaatc
cagaggaccagcagcggtaatgtagttgcctcccgatcgaccactgtcaagcggactgct
tcttccatattcccgtcgagtgtagtaaccagcattgatcctctacttttattcaaagat
gtttctgatacagaaaagcagaaccttttcgtcagcaagttgaatctttgttgtgttgtc
ttcgatttctcggatcccaacaagaactctgctgagaaggataagaagcggcaggcacta
ttagatatcatcgattacgttgactctgagggttcttgtttcactgagcccatcatttct
tctagctgtaagatgtttgctagcaacttgtttagggccttcccacctaatactcgctcc
agctctggtggtggcgagactgaagagcaagagcccacgtttgaaccagcttggtcacac
ctgcaacttgtctatgatttgttccttaagtttttagagtcgtcctcacttgatgccaag
attgcgaagaagtatgtgcatcattctttcattgtgagactgctgcacctctttgattcc
gaggaccccagggaaagagattgcttgaaagcaatcttgcacagaatctatggaaaattc
atggcgcatcgtccgttcatccggaaagcagtgagcaatatattttaccagtttgtgttt
gagacaaaccgacataatggtattgctgaattgcttgaagtttttggaagtgtcatcagt
gggtttgcgttgcctctaaaagaggagcataaactgttcctatggagggtcctaatacct
ttgcacaagccaaaaggcctaggtgtctatcatcaacagctaacttactgtgtgacacaa
tttgtagagaaagagcctaagctaataattgcagttataaatgggttattgagatattgg
cctgtgactaacagtcaaaaggaaatcatgtttttaagtgagttggaggaaatcttggaa
gccactaatgaagtggatatccagaagtgtatgcttcctttgttccagaggattggatat
tgtattaatagcccccatttccaggttgcagagagagccttactcatgtggaacaatgac
cgagtgattagtctggtatcacaaaattggcaatcagtaatgccactaatattgccggcg
ttggaaaggaacattcgcagtcattggaatcaagctgttttgaacctgacgcaaaacatt
aagaagttattatacgagatggatgaagaactatttctagcatgcaaaaagaagtttgag
gaggaggaagtgaaacaagatttaatggagaagggaaggatgacctgggagcacctggag
tcgactgctgctttccaaccagcaactaggaacgtagctgtccaggtgagacctgttatt
gctcctccagttgttgctgctctctcttga
DBGET
integrated database retrieval system
