KEGG   Zingiber officinale (ginger): 121979362
Entry
121979362         CDS       T08725                                 
Name
(RefSeq) protein SPA1-RELATED 2-like isoform X1
  KO
K16240  protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
zof  Zingiber officinale (ginger)
Pathway
zof04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:zof00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    121979362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zof04121]
    121979362
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    121979362
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Pkinase Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N WD40_RFWD3 WD40_like PK_Tyr_Ser-Thr DUF2124
Other DBs
NCBI-GeneID: 121979362
NCBI-ProteinID: XP_042387279
LinkDB
Position
5A:complement(5713066..5723675)
AA seq 1066 aa
MEGKTEATENTDTGNPNEASHIKNIESDQLPQQDNGKALETSGPEVSQDSDWPEQLSLLQ
SPEMSLQTVSGREFCDNIVNRDRFQRPCTNSRPTNLALKVGELTSKNYKSPNLSLDGCSS
SGKSSTMTHLWSNFKMVAGKAKEKTQNEYLQLGNKDAEGRAHLGSLDSSRPLTCMHSESK
TLKITENVGAADKHVVLDDSHSRLSFPGSIQSKIFSASGFQQFFNRSFIKGKTLASRHQE
SNDAFVANVQEQNIMRLNTDSKGTSISSHKQGDVPDSMCLLGGGIVAHHEGISLREWLQL
KLQRINRVERMQFFNQILDLVDACHCQGLALQHLQPSYFLVMPLNQVKYIGSFIPLGQKD
MLSISVEKDVHYASCLGKRKMHIKQSKEPGDCLELKYQKLTNNINACSRHSGFRGKDQSQ
EKGNISRSENFRSYLGGLALDKLYTIHRASSCTISQQSMSEFLKLEEGWYASPEELHDHI
TSLSSNIYSLGVLFFELFCHSETWEVHCSAMSDISVRILPSNFLSERPKEAGFCLWLLHP
DPYSRPKLSDIILSDLVKENRELLTIDHSFALTEEEDAEADLLLHFLLLSKEKMEKQVGD
LLANFECIRTDLEKVDGGSLLKVKFSSGDKYLPSSLNYIPESYSHDKTIKHVDELTRSPL
SCLYKERFLKNIDQLENAYFTMRSKKEASGPNSATRTDTDVLKMRDRNFHVQHTAVQETE
ELGTFFDGLYKFAQYNKFKVCGSLKNSDSVHCANVICSLSFDRDEDYFATAGVSKKIKIF
EFSSLLDDTVDIHYPLIEMTNRSKLSCVCWNNYIRNYLASTDYEGVVQLWDASTGQGLTK
FIEHQKRAWSVDFSQVDPAKLASGGDDFSVKLWSTNEKNCIGTIRNVANVCCVQFSPYSS
HLLSFGCANYRIYCFDLRNTRIPWCTLAGHGKAVSYVKFIDAETIVSASTDNSLKIWDLK
QTNASRLQDSSCKLTLSGHTNEKNFVGLSVLDGYITCGSETNEVYAYYKTFPMPMVSHKF
GSIDPITALETDDDGGQFVSSVCWRGKSNMVVATNSTGSMKVLHLV
NT seq 3201 nt   +upstreamnt  +downstreamnt
atggaggggaaaactgaagcaactgaaaacacagatactggtaatccgaatgaggcttct
catattaaaaacatagaaagtgatcagctaccacaacaagacaatggaaaagcacttgaa
acatcaggtccagaagtctcccaagactctgattggcctgagcaattgtctctgctgcaa
tcacctgagatgagtcttcaaactgtctctggaagagagttctgtgacaatattgtaaat
cgggaccgctttcaaaggccgtgtacaaactcacggcctactaacttagcacttaaagtg
ggagagctgacttctaagaattataagagccctaacttgtccttggatggttgctcgagt
agtggaaaatcctccaccatgacacatttatggtcaaattttaaaatggttgctggcaaa
gcaaaggaaaaaacacaaaatgagtatttgcaattgggaaacaaggatgctgaaggcaga
gcacatttgggttctcttgactcttcaaggccactgacatgcatgcattccgaatcaaaa
acattgaagataacagagaatgttggagcagctgacaaacatgtggtcttagatgattct
cacagtagactttcttttcccggaagcatccaatctaagatcttttctgcatctggattt
caacaattttttaatagaagttttataaagggtaagactcttgcatctagacatcaagaa
agtaatgatgcatttgttgccaatgttcaggaacaaaatattatgagacttaatactgat
agcaaaggaacatctatttcatcacataagcaaggtgatgtgccagatagcatgtgcctt
ttaggtggtgggatagtggctcatcatgaagggattagtttacgtgagtggcttcagctt
aagttgcaaaggataaacagggtcgagaggatgcaattctttaatcagattctggatctt
gtagatgcttgccattgccaaggtctagctttacaacatttacaaccatcatattttctt
gttatgcctctaaatcaagtcaaatacataggatcttttatcccgctaggacagaaggat
atgttgtcaatttctgtagaaaaggatgttcactatgctagttgtctgggcaaaaggaaa
atgcacattaaacaaagcaaggagcctggcgattgtttggaactgaagtatcagaaactt
actaataacatcaatgcatgttccagacattctggttttaggggaaaagatcaaagccaa
gaaaaaggtaatatttccagatcagaaaatttcagatcttatttgggtgggctggcattg
gacaagctttatacaattcatagagcaagttcatgcaccatcagccaacagtcaatgtct
gaatttttgaagttggaggagggatggtatgctagtccagaggaattgcatgatcacata
acttctttatcatcaaatatctacagtctcggggttctattttttgagctcttttgccac
tcagaaacatgggaagttcattgctctgcaatgtcagatatcagtgttcgaatccttcct
tcaaattttctatcagaaaggcctaaggaagctggtttctgcctttggttgttgcaccca
gacccttattctcggccaaaattaagcgatattattttgagtgacctagtaaaagaaaat
agagaattgttaaccatagatcattcttttgccttgactgaagaggaagatgctgaggct
gacttgttgttgcattttctcttgttgtcgaaagagaagatggagaagcaggtgggtgat
cttttagcaaactttgaatgtataagaacagatcttgagaaggtcgatggagggtctttg
ttgaaagttaagttctcttctggtgacaaatatttgccgtcaagcttaaattatatccct
gaatcttattctcatgataaaaccataaaacatgtggacgaactgactagatcacccctg
tcatgtctatacaaagaaaggtttttgaagaacattgaccagcttgagaatgcatacttt
accatgagatccaaaaaggaggcatctggacccaattctgcaacccgtacagacacagat
gttttaaagatgcgagatagaaatttccatgtccaacacactgctgttcaagagacagag
gagttgggaacattttttgatggtttatacaaatttgctcaatataataagtttaaagta
tgtggcagcctcaaaaattcagatagtgttcactgtgcaaatgtgatttgttctttgagc
tttgaccgtgatgaggactactttgctactgctggggtatcaaagaaaataaaaattttt
gagtttagctctcttttggatgacacagttgacattcattacccattgattgaaatgaca
aatagatccaagctcagttgtgtatgttggaataactatattcgaaattatttggcatca
acagactatgaaggtgtagttcagttatgggatgcaagcactggccaaggtttgacaaag
ttcatagagcatcaaaaaagagcttggtcagttgatttctcacaagtagatccagctaaa
ctggctagtggaggtgatgacttttctgtgaaactgtggagcactaatgagaaaaattgc
attggcaccatcaggaacgtagctaatgtctgttgtgttcagttctctccatactcctcc
catctgttgtcttttggctgtgccaattacagaatttactgttttgatctgcgaaatact
agaattccatggtgtacactggctggacatggaaaggctgtcagctatgtgaagttcata
gacgcagaaacaattgtttctgcatcaactgacaactcactcaaaatttgggatctgaaa
caaaccaatgcaagcagattgcaagacagttcttgcaagctgaccttgagtggtcataca
aatgagaagaactttgttggtttgtcggtcttggatgggtacataacatgtggttctgaa
accaatgaagtttatgcttactacaaaactttccctatgccaatggtttctcacaaattt
ggttccattgatccgatcaccgcactggagaccgatgatgatggcggacagtttgtctca
agtgtttgttggagaggcaaatcaaatatggtggtcgccacaaattccactggcagcatg
aaagtgctgcacctggtttaa

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