Zingiber officinale (ginger): 121979552
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Entry
121979552 CDS
T08725
Name
(RefSeq) YTH domain-containing protein ECT4-like
KO
K20102
YTH domain-containing family protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121979552
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121979552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
121979552
NCBI-ProteinID:
XP_042387483
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All DBs
Position
1B:131129029..131133383
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AA seq
700 aa
AA seq
DB search
MATVAPAAPADQSADLMQKLSLDSKNKSEDASEVTKTSGVQYGSSNGGEPIAPIPTYERS
LTPWLQEHTDASMCYLPNGYSSALYYGGYDGSMTEWEDYPRYVNSDGVEVPPLGVYGDMY
HPGYGYSPYSPYPSPGSPVPTMGHNNQLYTPQHYHFPATYYQPQTASGAPYTTSQNPSSK
GDVSTSTATELPPIPVDTTKANSNEAVKASTNSNNGTTKAKPNQQNTPSNTGVSFGKGTL
PGLNPSFGYQDPRFGYDGMWSPISWYDGSMFPDGQQRPTSTNNGSSMTSHIANTTSTRNQ
NLHPLPHLSGMHTPRSSAPGIVNKMYPNNRIYGQNANGFRGNQSFRSNIYDSSMNGRWVM
SMDNKYKHRGQGNGFYGYGNENLEGLSELNKGPRAGHFRSQKGFGPNFSVAVRGQSLSTS
VQDSSEVPDKDKYNKTDFLVTYSDAKFFIIKSYSEDDIHKSIKYNVWASTPHGNKKLDAA
YQESKEKNGCPVFLLFSVNTSGQFVGVAEMVGPVDFNKTLDYWQQDKWIGCFPVKWHIVK
DVPNSILKHITLENNDNKPVTNSRDTQEVKLEQGFQLLKLFKEHVSVTSILDDFTFYENR
QKVMQEKRPKQQQLQKKLVDGKPVIFDEKEKDNANGKPVLSKSLELVSILKKESAQNALA
VSEFTLAEKNGVPAVAGVAPKDAKPVTEKRVVANGVSNGY
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagtcgcccccgctgctcctgccgaccaatctgcagatctgatgcaaaagtta
tccctggactcaaaaaacaaaagtgaagatgcttcagaagttacaaagacttctggagtt
caatatggttcatccaatggcggggaaccaattgctccaatcccaacatatgagcggtct
ttgaccccttggcttcaggagcatactgatgcgagcatgtgctacttgccgaatggatat
tcttcggctttgtactatggaggttatgatggctcaatgacagagtgggaggattatcct
agatatgttaactctgatggagtggaggtacctccacttggggtttatggggatatgtat
catcctggatatggttattctccatatagtccatatccttctcctggttccccagttcca
actatggggcacaacaatcaactatacacaccccaacattaccacttccctgctacgtat
taccagccacagacagccagtggtgcaccatacacaacaagccaaaatcctagttccaaa
ggagatgtttctacatctactgccactgaacttcctcctattccagtagatacaacaaaa
gctaattcaaatgaagctgttaaagcaagtacaaatagcaacaatgggacaacaaaagca
aaaccaaaccaacagaatacaccatcaaatacaggtgtctcatttggtaaaggcacatta
cctggcctgaatccatcttttggttaccaggatccaagatttggatatgatggcatgtgg
tcacctatttcatggtatgatggttccatgtttcctgatgggcagcagagaccaacttcc
actaacaatggctcttcaatgacatctcatattgcaaatactacgtcaacaagaaatcag
aatctccatcctctccctcatctttctggaatgcatactccaagatcatcagctcctgga
atagtgaacaagatgtaccctaacaatagaatatatggtcagaatgctaatggattcaga
ggtaaccagagctttcgatcaaatatttatgactccagcatgaatggaagatgggtaatg
tcaatggataacaagtataagcatagaggtcagggcaatggtttctatggctatggtaat
gagaacttagaaggcctgagtgagcttaataaaggaccaagggcaggtcattttagaagc
caaaagggatttgggcctaatttttctgttgcagtaagggggcaaagtctttctacaagt
gtccaggactcttctgaagttcctgataaagacaaatacaacaagacagatttcctagta
acttattcagatgccaagttttttataataaaatcatacagcgaggatgatattcacaag
agtatcaagtacaatgtttgggctagtactccccatgggaacaagaagcttgatgctgct
tatcaggaatctaaagagaaaaatggatgcccggtgtttttattgttctctgtcaacact
agtggacagttcgtaggtgttgcagagatggttggtccggttgatttcaacaaaacatta
gattattggcagcaggacaagtggattgggtgttttcctgttaaatggcatattgtaaag
gatgtgcccaatagcatcctaaaacatattacattggagaacaatgacaacaaacctgtg
acaaacagcagagatactcaggaggtgaagcttgaacaaggatttcaactgctcaagctt
ttcaaggaacatgtgagcgtgacttcaattctggatgattttactttctatgagaaccgc
cagaaggtgatgcaagaaaagagaccaaagcaacaacagttacagaagaagcttgtggat
ggaaaaccagtcatatttgatgaaaaagaaaaggataatgccaatgggaagcctgtgttg
tcgaagtccttggaactggtttctattttgaagaaagaatctgcacaaaatgcacttgcg
gtgtcagaattcactttagcagaaaaaaatggtgtccctgctgttgctggtgttgctccg
aaggatgctaaaccagtgactgagaagcgagttgtggctaatggtgtatctaacggttat
taa
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