Zingiber officinale (ginger): 121979682
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Entry
121979682 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase RHA2A-like
KO
K16282
E3 ubiquitin-protein ligase RHA2 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121979682
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121979682
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121979682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_Vps41
zf-ANAPC11
zf_RING_Vps8_fungal
zf-C3HC4_3
zf-RING_16
Prok-RING_4
U-box_ZFPL1
MSG_insertion
RINGv
zf-RING_4
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
121979682
NCBI-ProteinID:
XP_042387605
LinkDB
All DBs
Position
5A:79076585..79077070
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AA seq
161 aa
AA seq
DB search
MGLSNYLHDVSGDSLPLLLLAAAAASIAYLRSFLLRFLPLSSSHADAEDSDPSSLGSGLA
GLVVLSDRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLSDGDSVRRLPCRHVFHRECLD
GWLGQLNLSCPLCRLQLAVPELRAATDRRIGAELVAWFSHR
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctcgaactatctccacgacgtctccggcgactctctccccctcctcctcctc
gccgccgcggctgcctccatcgcctacctccgctcctttctcctacgcttcctccccctg
tcctcctcccacgccgacgccgaagacagcgatccctcctcgctcggatccggcctcgcc
ggcctcgtcgtcctctccgaccgcctcgccgcagaccgcgccttccccttccttctctcc
tcccgtggcgaggccgaagccccgcgcccgctgtgcgcggtctgcctctgcgacctctcc
gacggcgacagcgtccgccgcctcccctgccgccacgtcttccaccgcgagtgcctcgac
ggctggctcggccagctcaacctctcctgcccgctctgccgcctccagctcgctgtgccg
gagctccgcgccgccacggaccgccggatcggagccgagctcgtcgcctggttctcccac
cgctga
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