Zingiber officinale (ginger): 121979927
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Entry
121979927 CDS
T08725
Name
(RefSeq) sister chromatid cohesion 1 protein 1-like
KO
K06670
cohesin complex subunit SCC1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
121979927
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121979927
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GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
121979927
NCBI-ProteinID:
XP_042387836
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Position
5A:117630136..117635116
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AA seq
600 aa
AA seq
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MFYSHQLLAKKAPLGQIWMAATLHAKLNRRKLDKLDIIKICEEILNPSVPMALRLSGILM
GGVVIVYERKVKLLYDDVTRLLAEINGTWKTKTVADPTVLPKAKAQAKFEAVTLPECVDM
DVEQSMLLSDASVAASRFQRMRLDEVEEHYINIDIRNGDPPDTYHQVDAENITLFDDFGS
GPPEGNHFERFDIGEDETQINYTPQEQPHFHNPLRPSPPVDDGPKSSMPHQLNTSDANHR
MNVEEPKEKGEGIQQQQQVKQNARRKRTHLILDEQLMIPGNHYQSWLQDTSDIVSKRGRT
VRCHNPIRSTKISKLMNLPPVALITGLEMFPSRVHFPAPLIELWRNSTILGDKSPAEERH
EAHESFLEEFQAEIPLNPEFQAEVPPNNEFQAEIQPNPLEFSIEKVRANLENLEFQGIDK
SFSSDHFATPGSQGQSSKSIPSSGSGHFMPLEPEIQLHSGRSKRKQNSSSTTNFGNLDPV
EEESPLQQDLRSFKLRRISQLSPAPDAELLEETGPTQTPVPPSSTSIDHTTELIRTHLKL
HFDTPGAPQSESLNQLALGMNKKTAALLFYQTCVLATFDFIKVEQHVAYGDILISRGPKM
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgttctactcgcaccagctcctcgccaagaaggctcctctcgggcagatatggatggcg
gctactctgcacgccaagttgaaccggaggaagctcgacaagctcgatatcatcaaaatc
tgtgaggagattctgaatccgtcggttccgatggccctgcgcctctctggcattctcatg
ggcggcgttgttatcgtctatgagcggaaggtcaagctcctctacgacgatgtcacgcgg
ctactggcagagatcaatggaacatggaagacgaagacggttgccgatcccaccgtcctt
ccgaaggcaaaagctcaagccaagttcgaggcggtgacgctgccggagtgcgtggacatg
gatgtagaacagtcgatgctcctctccgacgcctccgtagcagcctccagattccaacgc
atgcgattggatgaggtggaagaacactacattaacatcgacattagaaacggtgatcca
ccagacacctatcatcaagttgatgctgaaaatatcaccctatttgacgattttggatca
ggaccaccagagggtaaccattttgagaggtttgacataggagaagatgagacacagatc
aactacactcctcaagagcaaccccattttcacaatcctcttagaccctctccaccagta
gacgatggacccaaaagctcaatgcctcatcaactaaacacttcagatgcaaaccatcgt
atgaacgtggaggaaccgaaggaaaagggagaaggtattcaacaacaacagcaggttaaa
caaaatgcacgcagaaagcgtacccatctaatcctggatgagcaactcatgataccaggc
aaccactatcaatcttggctccaggacacttctgatatagtgtctaaaagaggaagaact
gttaggtgtcataatcccattcgatccacaaagatatccaagctcatgaacttgccacca
gtagctctcattactggtttagagatgtttccttctcgagtgcatttccctgcccctcta
attgaattgtggaggaattctacaattttaggagataaatcacctgcagaagagagacat
gaagcacatgaatcttttctagaagaatttcaggctgaaataccactcaaccctgagttc
caggctgaagtcccacccaacaacgaatttcaagccgaaatacaacccaaccccttagag
ttctccattgagaaagtcagagcaaaccttgaaaatttggagttccagggaattgataag
tcatttagtagtgaccattttgctactcctgggagtcaagggcagagttcaaagtctatt
cctagctctggttctggacatttcatgccattggaacctgagatacaattacattctgga
aggtctaaaagaaagcagaattcctcatcaacgactaactttggcaaccttgatccagtt
gaagaggagtcaccacttcagcaagatttaagaagtttcaaactcagaaggatatcacaa
ttaagtccagcccctgatgctgaactactggaggaaaccggaccaactcaaaccccagtt
cctccatctagtacttcgatcgaccacactactgaattgatccggacgcatctcaagttg
cattttgatacgccaggagccccacagtctgaatcattgaaccagttagctttaggaatg
aacaagaaaacagctgctctactcttttaccaaacttgcgttctcgccacctttgacttc
atcaaggtggaacaacatgtagcatatggggacatactgatctcaagagggcctaagatg
tag
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