Zingiber officinale (ginger): 121980137
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Entry
121980137 CDS
T08725
Name
(RefSeq) piezo-type mechanosensitive ion channel homolog
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121980137
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zof04040
]
121980137
Membrane trafficking [BR:
zof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121980137
Ion channels [BR:
zof04040
]
Other channels
Mechanosensitive channel (Piezo)
121980137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
Motif
Other DBs
NCBI-GeneID:
121980137
NCBI-ProteinID:
XP_042388036
LinkDB
All DBs
Position
5A:146249867..146289474
Genome browser
AA seq
1688 aa
AA seq
DB search
MPPWIDDLSARARTRPMTGFLGSFLLPLLLLAASLVGWNLISLVNMLLFFAIQFTTPRVG
FNSWRVYTIACCTVIFSVLVLIAETIFHILWHIKGDKWIVADAGWFKLIGFVRDQPWGPT
SAIYFVIIQLSTALVALVEVLSNRFHQGSFLLNFSMSTNDIGYHLRVVCCLILPAIQLVV
GISHPSWISLPFFICSCIGLVDWSLTSNFLGLFRWWRPLLIYTCFSILLIYTYQLPVSFP
NMFLTFADFVGLYKITGRSDFPELCSGASLLLFYYMSSVCLLCITIGIYDPYSSSDHYLL
PFRDYFALSPFVYIIPWTRETSGVEIHCHDCWSKSDRYFRFCKQCWLGMIVDDSRMLVSY
YLVFIFSSFKLRADHYLGFSESHTYFQMMSQRIRASVWKDLSFETKSFWTFLDYLRLYSY
CHLLDIVLALILITGTLEYDVLHLGYLGFALVFFRMRLEILKKKNKIFKFLRIYNFTVIV
LSLAYQSPYLGVFSAGKCEQIDYIYEVIGFYKYDYGFRITSRSALVEIIIFLLVSVQSYI
FYPGEFDYVARYLEAEHIGAMVQEQEKMASWKIAQLQHTRKTLEQKCQRNMQVEKIKSEM
LNLQVQLNSFNSVQPLDDGTLQTGLRHRSSSISKEKVGWMPDNKFRSPSKKDEDSNNEFY
HSFDFAVPEIYTNVTSQLLSDFQSSPTSAKSGSSISVDMKHNSDNICEISEVGDIDELTL
WNTHRRERDKIKNKENPLSSAVQLIGDGVSQVQSLGNQAVTNIVSFLNIEPEDPNSTGHS
NTDAAIDKGLERQWNAEYAYSDEMSSVNSSTATTRPSASLQIGRIFQFIWSQMRSNNDVV
CYCCFILVFLWNFSLLSMFYLAALFLYALCVNSGPTFMFWIIMLIYTEFNILVQYLYQII
IQHCGLIMELPLLQKLGFPEHKIKASFVVSTLPLFLVYISTLLQSSITAKDGEWAPVADF
KISFGQHHFDEGFRSVTGWKDKMQRLISSLMNPLWMISRSFTRYWRSITRGSEAPPYFVQ
LSMEVNPWPDGGIQPESIESKINELLIKSHEKKCDAEDELPCHSASRVRIQSIDRSQENN
NIILAVLEVVYACAPVRCVPVEWYRSLTPAADVAAEIQNSLEFGILKNIQFPYPIISVIG
GGKREIDLYAYVFGADLAVFFLVAMFYQSVIKNNSKLIDVYRLEDQFPKEFVFILMVLFF
LIVLDRIIYLCSFGITKVIFYLFNLILFTYSITDYAWSMRISSNHIGELALRAIFVTKSI
SLVLQALQIRYGIPNKSTLYRHFLTSKVTQIHYLGFRLYRVIPFLYELRCVLDWSCTYTS
LTIYDWLKLEDIYASLFLVKCDADLNRARHNLGQRQSKMTKFCSGICLFFILICVIWAPM
LIYSSGNPTNIANPVVDVSIQIDIKSLGGRLTLYQSTICEKFPGGSLGNYDILNLHNYLD
TYNIDDIQLICCEADSSTIFMAPSIVQSRYARSIDQNTTIIFTWIFTRERPKGKEAVKYE
SNVENCPCLDNVKQVLSGTGTLDGFNIPDAYPQYFRVTSSGEVRPLEALVKSVSGDLFIN
NGNPPWWSFNINVTDSQECNGLIGPSVVVVSEETPQGILGETISKFSIWSLYLTFVLAVG
RFIRLQCSDLRMRIPYENLPSCDRLIAICENIYAARAEGELEVEEVLYWTLIKIYRSPHM
LLEYTKSD
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgcctccctggattgatgatctgtcagctcgtgcccggacaagaccgatgacgggattt
cttggtagtttcctgctgcctctactgcttctggcagcttctttggttggttggaatttg
atttctctggtcaatatgctcttgttttttgccattcaatttactactccaagagtagga
ttcaattcttggagagtgtatactatagcttgctgtactgtcatcttttcagtacttgtg
cttatagcagaaacaatatttcatattctttggcatattaaaggggacaaatggattgtt
gctgatgctggctggttcaagctaattggatttgtgagagaccagccatggggaccaaca
tcagctatttattttgttattatacagctatcaactgctcttgttgctttagttgaagtt
ctcagtaatagatttcaccaaggctctttcttgctaaacttttcaatgtctacaaatgat
ataggttatcacctgagagttgtttgctgtttaatccttccagctattcagctggttgtg
ggaattagtcatccatcttggatatctctacccttctttatttgtagttgtattggcctt
gttgattggtctctaactagcaactttcttggcctttttcggtggtggaggcctctcctg
atatatacttgcttcagtattcttctcatttacacctaccagcttcctgtgagttttcct
aacatgttcctcacatttgctgattttgttggcctgtacaaaataacaggaagatcagac
tttcccgaactctgttctggggcatctcttcttttattttactacatgtcttcagtatgc
ctcttatgtataactattggcatttatgatccatattcttcttctgatcattacctgcta
ccttttagggactattttgcattatcgccatttgtttatatcattccatggactagggaa
actagtggggttgaaattcactgccatgattgttggagtaagtcagaccgctacttcaga
ttttgcaagcaatgttggctagggatgattgttgatgattcacgaatgcttgtgagctac
tatttggtttttatcttttcttctttcaaactccgtgctgatcattatttaggcttctct
gaatcacatacctactttcagatgatgtcccaaaggataagggcatctgtatggaaagat
ctctcatttgaaacaaaaagcttctggacatttcttgactatctgaggctgtactcttat
tgccatttactagatattgtacttgccttaattttgattactggaactttggaatatgat
gttttgcatcttggataccttggctttgcccttgtgttcttccggatgagactagaaata
cttaaaaagaagaacaaaatcttcaaatttttgcgaatatataattttacagtcattgta
ctttctcttgcctatcaatctccctatcttggtgtctttagtgctggcaagtgtgagcag
attgactacatatatgaggttattggtttttataaatatgattatggattcagaataaca
tcaaggtctgcgttggttgagataataatttttcttctagtttctgtgcagtcatatatc
ttctaccctggagagtttgattatgtagcgagatatcttgaagcagaacatattggtgct
atggttcaagagcaagaaaaaatggcttcttggaaaattgcacaattgcagcatacccgt
aaaacattagaacaaaaatgtcaacggaatatgcaagttgaaaagataaaatctgagatg
cttaatctacaagttcagctcaatagctttaactctgttcagcctcttgacgatggcaca
ctgcaaacaggtcttcgacacagaagctcatccatcagtaaagaaaaagtaggttggatg
ccggataacaaatttagatcaccttctaagaaggatgaggatagcaataatgaattctac
cattcctttgactttgcagtgcctgaaatatacacaaatgtcacgtctcagttattatct
gatttccaaagctcaccaactagtgcaaaaagcggaagctcaatttctgtagatatgaag
cataactcagataatatttgtgagataagcgaagttggtgatatagatgaattaacattg
tggaatacacatagaagagagagagacaagatcaagaataaagagaatcctttgtcttct
gccgtgcagctaattggtgatggtgtttcacaagttcagtctcttggaaatcaggcagtt
actaacattgtgagtttcttaaacattgagcctgaagaccctaattcaactgggcattcc
aatacagatgctgcaatagataagggactagagagacagtggaatgcagaatatgcttat
tcggatgaaatgtcctctgttaattctagtacagccacaacaagaccatcagctagtttg
caaataggaaggatctttcagtttatatggtcacaaatgcgctcaaataatgatgttgtt
tgctactgttgcttcatacttgtgtttctgtggaattttagtttgctatcaatgttttac
cttgctgctcttttcctttatgccctttgtgtaaattctggccctactttcatgttctgg
attataatgctgatctacactgagttcaatattttggtgcaatacttgtatcagattatt
atccagcactgtggactgatcatggagctacctctattgcaaaaattggggttccctgaa
cataaaataaaggcatcctttgttgtaagcacattacctctgtttcttgtgtatatatca
actcttctgcaaagttcaataacagccaaagacggtgagtgggcaccagtggcagatttt
aaaatttcatttggccaacatcattttgacgaaggctttaggtcagtaactggttggaag
gataagatgcaaaggctaatttcatcactaatgaatccattgtggatgatatcgagaagc
ttcactaggtactggaggtcaattactcgaggatcagaggcacccccatactttgtacaa
ctgtcgatggaagttaatccatggccagatggtggaatccaaccagagagcatagaatct
aaaataaatgagttgcttattaaatctcatgaaaaaaaatgtgatgccgaagatgaattg
ccatgccattctgctagtagagttcgaattcaaagcattgacagaagtcaagaaaataac
aatatcattcttgctgttcttgaagttgtgtatgcttgtgctcctgtcagatgtgtccca
gtagaatggtacagatcattaactccagctgcagatgtagcagcagagattcagaactct
cttgaatttggaattctcaaaaatattcaattcccataccctattatttctgtgattgga
ggcggcaaaagagaaattgatttatatgcatatgtatttggtgctgatttggcagttttc
tttctagttgctatgttttatcaatcagttatcaagaacaatagcaagcttattgatgtt
tatcgactcgaagatcagtttcccaaggaatttgttttcatactgatggtactctttttc
ttaattgttcttgaccgcattatatacctatgttcttttggcatcaccaaagttattttt
taccttttcaatctcatcctcttcacatactcaatcacagattatgcttggtctatgaga
atatcaagcaatcatattggagaactcgctcttcgagctatatttgtaacaaaatctatt
tccttagtattacaggcattacaaatccgctatgggattccaaacaaaagcaccttatat
cgtcattttttgacaagcaaagttacacaaatacattatttgggttttagactttaccgt
gttataccattcttatacgaactccgatgtgtactggattggtcatgcacatatacatct
ctgacaatttatgattggttgaagttggaggacatctatgcaagtttatttcttgtcaaa
tgtgatgctgatctaaacagagcaagacacaatctaggccaaagacaaagtaaaatgacc
aaattctgcagtggcatttgtttattcttcattttaatatgtgtaatctgggcccctatg
ctgatatacagcagtggtaatccaaccaacatagctaatcctgtagttgatgttagtatt
caaattgatatcaaatcattgggtgggaggctcaccctataccagtcaactatatgtgaa
aaatttcccgggggcagtctgggtaactatgacatacttaaccttcataattatctggat
acatacaatatcgacgacattcaactgatctgctgtgaagctgattcaagcaccattttt
atggccccctctatagttcagagcagatatgccagatccattgatcaaaataccactatt
attttcacttggatcttcacaagggagaggccaaaggggaaggaagctgtgaaatatgaa
tcaaatgttgaaaattgtccctgcttagataatgtcaaacaagtgctgagtggcactggc
acactagatggatttaatatacctgatgcttatcctcaatactttcgggtaactagctct
ggtgaagtaaggcctcttgaagcacttgtaaaatctgtaagtggcgatcttttcataaat
aatgggaaccctccatggtggtccttcaatattaatgttacagattcccaagaatgcaat
ggactgattggaccaagtgttgttgttgtgtctgaagagacaccacaaggtatccttggt
gaaactattagcaagttcagcatctggagtctctatcttacttttgttctggctgttgga
cgatttattagacttcagtgttctgacttgagaatgagaataccctatgagaatctcccc
tcatgtgacagactgatagcaatatgtgagaacatatatgctgctcgagctgaaggcgag
ttagaagttgaggaggttctctattggaccctaataaagatctacagatctccacacatg
cttctcgagtacaccaagtcagattga
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