Zingiber officinale (ginger): 121980152
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Entry
121980152 CDS
T08725
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121980152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
121980152
Spliceosome [BR:
zof03041
]
Common components
Common spliceosomal components
SR proteins
121980152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_5
Nup35_RRM_2
SET_assoc
RRM_occluded
RBD_RDR6
DUF2129
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
121980152
NCBI-ProteinID:
XP_042388049
LinkDB
All DBs
Position
1B:133716161..133720687
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AA seq
248 aa
AA seq
DB search
MRPIFCGNFEYDARQSELERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRTEF
GRQGRRLRVEWTKQERGGSRRSGSSRRSPANMKPTKTLFVINFDPINTRTRDLERHFEPY
GKISNVRIRRNFAFIHFEDQEDASKALEATNMSKLLDRIISVEYALRDDDDKRNGYSPER
RGRDRSLERRGRDNGRSPSPYGRGRERDSPDYGRGSSPYNKLEKRGSPNYGRAESPGNER
DSPRQERE
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccattttttgtggaaactttgagtatgacgctcgccaatctgagttggagcgc
cttttcagcagatatgggaaggttgacagggtagatatgaaatcaggatttgcatttatt
tacatggaagatgaacgggatgctgaggatgctattcgtgcccttgataggactgagttt
gggagacagggaaggcggcttcgtgttgaatggacgaagcaagagcgaggtggcagtagg
cgatcaggcagttcaagaaggtctcctgcaaacatgaagcctacaaaaactttgtttgtc
ataaactttgatccaatcaatacaaggacgagagatttggagagacactttgaaccttat
gggaagatatcaaacgttaggattagaagaaattttgcgtttatccactttgaggatcag
gaggatgcttcaaaagctttagaggcaactaacatgagtaaattgttggatcggattata
tccgtggagtatgctcttcgtgatgatgatgacaaaagaaatgggtacagccctgagaga
agaggtagagatagatccctggaaaggagaggccgtgacaatgggcgttctccaagtcca
tatggaagaggcagggagagggatagccctgattatggtcgtggttcaagtccatacaac
aaactggaaaaaaggggcagtcctaattatggaagagctgaaagccctgggaatgaaaga
gattctcctaggcaagaaagggagtga
DBGET
integrated database retrieval system
