Zingiber officinale (ginger): 121980196
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Entry
121980196 CDS
T08725
Name
(RefSeq) la-related protein 6C-like
KO
K15191
La-related protein 7
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
121980196
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
121980196
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
La
RRM_1
PAM2
Whi3-like_N
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
121980196
NCBI-ProteinID:
XP_042388086
LinkDB
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Position
5A:151430515..151432457
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AA seq
435 aa
AA seq
DB search
MAQETRGEEEKIKEVVEEETTTEAGALSPRFKLNVHAPEFVPRSHLPAVATAPPSSLPGG
CFYPYLQFFNGGNGGGGGGSLGPEWFYFADQESTHFVPDFYGKGAAASPKNSSDLAQKIV
KQVEYQFSDTNLVANDFLMKIMNKDPEGYVPMSVVASWKKIKALDVNNYTLIKALKTSSK
LVLSEDGKKIKRKQLFTERDKEELQSRTVVVENLPEDYSRQNLEKIFSVAGCVKNIRICH
PQEPNSARSSKNDVLISNKLHALVEYESTDQAEKAVEKLNDERNWRKGLRVRTMLRCSPK
SVIRNKKLDFDHFDIFSDDEQSSSSQTLAGSPRGDQVPPDHSVSRLARCCLRRRPPRTDW
FTLAQNEESQNGARKGWGRGRGGKALGQGGGQAGEAMSKLGCPQSPRMPDGTRGFTMGRG
KPSPATTSTLGPVGP
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagaaaccagaggagaagaagagaagatcaaagaagtggtggaggaagagacg
acgacggaggcgggtgctctgagcccaaggtttaagctgaatgtccacgcgccggagttc
gtgccgcggtcgcacttgccggcggtcgccaccgcgccgccgtcttccttaccaggaggg
tgcttctacccctacctccagttcttcaacggcggcaatggcggcggcggcggcggctca
ttgggaccagaatggttctacttcgcagaccaagaatccactcacttcgttccggatttc
tacggcaaaggcgcggcagcaagcccaaagaacagcagcgatctagctcaaaagatagta
aagcaggtggagtaccagttcagcgataccaatctggttgcaaatgatttcctaatgaag
attatgaacaaagatccagaaggatatgtgccaatgtcagtggttgcttcttggaaaaag
ataaaagctcttgatgtcaataactacacgctcattaaagccctcaagacctcctctaag
cttgttcttagcgaggatggcaagaagatcaaacgcaagcaacttttcactgaaagagac
aaagaggagctccaatctcgtactgttgtggtagagaatctgccagaggattactcgcgc
cagaaccttgaaaaaatattcagcgtcgctgggtgcgtgaagaacatcaggatatgccat
cctcaggagccaaactcagcgagaagctccaagaatgatgtgctgatcagcaataagctg
catgcgctggtggagtacgagagcacggatcaagctgagaaggcggtcgagaagttgaac
gatgagaggaactggagaaagggccttcgagtgagaacgatgctacgatgctctccaaaa
tctgtgatcaggaacaagaagctggacttcgatcacttcgacatattctccgacgatgaa
cagtcgtcctcttcccaaactctggccgggtctcctcgcggcgatcaagtgccccccgat
cacagcgtaagtcgactagctcggtgctgtttgcggcggcggccgccgcggactgactgg
tttactttggcgcagaacgaggagagccagaacggggctcggaaaggctgggggaggggg
cgaggaggcaaggcgctggggcagggcggcggccaagcaggggaggcaatgagcaagcta
ggctgcccgcaaagcccccggatgcccgacggcacgcgcgggtttacgatggggcggggg
aagccgtctccggcgacgacgagtactcttggtcccgtcgggccatga
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