Zingiber officinale (ginger): 121980209
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Entry
121980209 CDS
T08725
Name
(RefSeq) homeobox-leucine zipper protein ROC5-like isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121980209
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
121980209
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121980209
NCBI-ProteinID:
XP_042388104
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All DBs
Position
1B:complement(133962052..133965809)
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AA seq
785 aa
AA seq
DB search
MSFRRSASMNAGGDLSPRGLVSHRSQKKHSFTSPALSLGLQTGTEAQMNLSRITGDENDC
RSGSDNLETVSGDDVDQEQNPRKKKKRYHRHTPQQIQELEALFKDCPHPDEKQRLELSKR
LCLESRQVKFWFQNRRTQMKTQIERHENAILRQENDKLRADNMAIGEATRNPVCSNCGGA
AMLGDISLEEQNLRIENARLKEELDRLCALAGKFLGRSTPCFAADNIDVAPPPFPRSLLE
LGVGSNGGFAAGLVPPELFPPTPATISPLHGGGAVAHLTSSDRSMLLELALAAMDELLTM
AHMDAPLWIRSSDGSAEALNYEQYHRSVSRIAGLSPAGFVAEASRQTGMVIVNSLALVET
FMDSDRWANMFSSIVAKNTTVEVICNGAGGTKNGALQLMRAELQVLSPLVAIREVNFLRF
CKQQAEEGTWVVVDVSVDFIRENASSGSSCRLMPSGFVVRDMPNDYSKLVWVEHAEYDES
QVHLLYRPLLRSGLAFGAGRWLATLQRRCECLAILSSASNLDESGTITASGRRSMLKLAQ
RMTEAFCAGVCKSSAHEWTKLESHSIGPDVHVMTRKSVGDPGEPAGVVLSTATSVPLPLI
SPKRLFDFLREAGLRSKWDILSNGGPMYEMAHIAKGQAAGNAVSLLRASVRIPLINQITR
KQQLNPKSQIPFCNTQAVSSNQPSMLILQETCADASGAMVVYAPVDVPAMHLVMNGGDSA
YVALLPSGFAILPDGGEGSLLTVGFQILVNNQPTAKLTVESVETVNSLISCTVQKIKAAV
FHYGD
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaggagatcggcctccatgaacgccggcggtgatctctctccacggggcctc
gtttcccacagatcccaaaaaaaacattccttcacctccccagctctctccctcggcctg
caaaccggcacggaagcacagatgaacttaagccgaataactggcgatgagaacgattgc
agatcagggagcgacaacttggaaactgtctccggcgacgacgtcgatcaagaacagaat
ccccgaaagaagaagaagagataccatcgccacacgccgcaacaaatccaagaactcgaa
gctttgttcaaggattgccctcatcctgatgagaaacaaaggcttgaactgagcaagcgg
ctttgcttggagagccgccaggtcaagttctggttccagaatcggcgcactcagatgaag
acacaaattgagcggcacgagaacgcgatcctcaggcaggagaacgacaagcttcgtgcg
gacaacatggcgatcggggaggcgacgaggaatcctgtctgcagcaactgcggcggcgcg
gcgatgctcggcgatatctccctcgaggagcagaacctccgcatcgagaacgccaggctc
aaagaagagctcgaccgcctctgcgccctcgccggcaagttcctcggccgctccacgccg
tgtttcgccgctgacaacatcgacgtcgcgccgcccccctttccgagatcgctcctggag
cttggcgtgggcagcaacggcggcttcgccgcaggattagtccctcccgaactttttcct
ccgacgcctgcgaccatcagcccgttgcacggcggcggtgccgtcgcacacctgacctca
tccgacaggagcatgttgttggagctcgcactggcggccatggatgagctactgaccatg
gcgcacatggacgcaccgctttggatccggagttcggatggtagcgcggaggccttgaac
tacgagcagtatcaccgcagcgtcagccgcatcgccggcttgtcgccggctggatttgtc
gccgaggcctcgaggcagaccggaatggtgatcgtaaatagcctagctctcgttgaaaca
ttcatggattctgatcgttgggcaaatatgttctcttccatcgtagcaaagaacacaacc
gtagaagtcatatgcaacggtgcgggcggaactaaaaacggcgctttgcaactcatgcgc
gctgagctacaagtgttgtcgccgttagttgcgattcgggaggtgaacttcctcagattc
tgtaagcagcaggcggaggagggcacttgggttgtggtggatgtctccgtcgactttatc
agagaaaacgcatcgtctggatccagctgcagattgatgccttctggatttgtggtacga
gatatgcccaatgattactcgaagctcgtatgggtggagcacgccgagtacgacgagtct
caggtgcatcttctctaccgcccgctgctccgctccggcctggccttcggcgccggtcgg
tggctagccacccttcagcgccggtgcgagtgcctcgccatcctctcgtccgcttccaac
ttggacgagtctgggacgataacggcgagcgggcgacggagcatgctgaagctggcgcag
aggatgaccgaagccttctgcgctggcgtttgcaagtcgtcggcgcacgagtggaccaaa
ctggaatcgcacagcatcgggcccgacgtgcacgtgatgacgaggaagagcgtcggcgac
ccgggcgagccggccggcgtggttctcagcaccgccacctctgttcccctgcccctgatc
tcgccgaagcgcctcttcgacttcctccgggaggcgggcctccgaagcaagtgggacatc
ctctccaacggcggccccatgtacgagatggctcacatcgccaaaggccaggccgccgga
aacgccgtctccctcctccgtgccagcgtacgcattccgttaattaatcaaatcacaagg
aaacaacaattaaatccgaaatcacaaatcccattttgtaacacgcaggcggtgagctcg
aaccaaccaagcatgctgatattgcaagagacgtgcgccgacgcgtcgggcgcgatggtg
gtatacgcgccggtggacgtgccggcgatgcacctggtcatgaacggcggcgactcggcc
tacgtggcgctgctgccttcggggttcgccatcctcccggacggcggggagggctctctt
ctcaccgtcggattccaaatcctcgtaaacaaccagccgacggcgaagctgacggtggag
tcggtggagaccgtcaacagcctcatctcctgcacggttcaaaaaatcaaagccgcagtg
ttccactacggggactaa
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