Zingiber officinale (ginger): 121980273
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Entry
121980273 CDS
T08725
Name
(RefSeq) protein EXPORTIN 1A-like
KO
K14290
exportin-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
zof03013
Nucleocytoplasmic transport
zof03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121980273
03008 Ribosome biogenesis in eukaryotes
121980273
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121980273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121980273
03009 Ribosome biogenesis [BR:
zof03009
]
121980273
03016 Transfer RNA biogenesis [BR:
zof03016
]
121980273
03036 Chromosome and associated proteins [BR:
zof03036
]
121980273
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121980273
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121980273
Pre-60S particles
121980273
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121980273
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121980273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
IBN_N
CRM1_repeat
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
121980273
NCBI-ProteinID:
XP_042388181
LinkDB
All DBs
Position
5A:18976069..19006798
Genome browser
AA seq
1075 aa
AA seq
DB search
MAERLRDLSQPIDVPLLDATVAAFYGTGSKEERSAADQILRELQNNHDTWLQVVHILQNS
QNLNTKFFALQVLENVIKYRWNALPVEQRDGIKNYISDVIVQLSSNESSFRKERLYVNKL
NVILVQVLKHEWPARWQSFIPDLLSAAKSSETICENCMAILKLLSEEVFDFSRGEMTQQK
IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLEIL
LKFFPMGSYQNLTLQCLTEVAALQFGDFYDPQYVKMYTIFMVQLQTIIPHGTNFAEAYTN
GSSEEQAFIQNLALFFASFFKSHIRVLESAPANRGGLLMGLEYLIGISYVDDTEVFKVCL
DYWNLLVLELFEAHHNLENPALTASLMRLQPTLMPEVVDGLPSPLVQRRQLYSVPLSKLR
TLMICRMAKPEEVLIAEDENGNIVRETMKDIDVLVQYKIMRETLIYLSHLDHEDTEQQML
KKLNKQLSGDEWSWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKDNK
AVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKR
KFVTTQVGENEPFVSELLSSLSITVSDLQPHQVHSFYESVGQMIQAEPLPAKRDEYLRRL
MDLPNQKWAEIIGQASHSVDFLKDQDVIRTVLNILQTNTSAASSLGTYFFPQISLIFLDM
LTVYRMYSELISNSIVEGGPFASKTSFVKLLRSVKRETLKLIETFIDKAEDQPHIGKQFV
PPMMDPVLGDYARNLPDARESEVLSLFATIINKYKIVMMEYVPRIFEAVFQCTLEMITKN
FEDYPEHRLKFFSLLCAIGTHCFQALIQLSSQQLKLVMDSIIWAFRHTERNIAETGLNLL
LELLKNFQVSEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVDSGTL
TEPLWDSSTVPYPYPNNTMFFRDYTIKLLGSSFPNMSVAEITTFVGGLFESKNDPPNFKN
HIRDFLVQSKEFSAQDNKDLYAEEAAVLREQERRRMLSIPGLIAPNERQDEMLDS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagattgagggatttgagccagccgatcgacgtgccccttctggatgcgacc
gtggccgcgttttatggaacgggatccaaggaggagaggtcagctgcagatcagatattg
cgagaattgcaaaacaaccatgacacctggctacaagtggttcacattctacaaaattca
caaaacttaaataccaagttttttgccctacaggtactagaaaatgtcattaaatacaga
tggaatgcgttaccagttgaacaacgcgatggaataaagaattacatatctgatgtcatt
gtacaactttctagtaatgaatcctctttccggaaggagcgattgtatgttaataagctt
aatgtcatattagtgcaggtcttaaagcatgagtggccagccagatggcagagcttcatt
cctgatcttctctcagctgcaaagagcagtgaaacaatttgtgaaaattgtatggctata
ctaaagcttttgagtgaagaggtttttgatttctcaagaggagagatgactcaacaaaaa
ataaaagaactaaagcagtcattaaatagtgaatttcagctcatccacgagttgtgctta
tatgtgctatcagcatctcaaagaacagagcttatccgagctactttggcaacacttcat
gcctttctatcatggattccacttggctatatatttgaatctccgctgttggagatactc
ttgaaattctttcccatgggatcgtaccagaaccttactctgcagtgtttgacagaggtt
gcagcgcttcagtttggtgacttttatgatccacaatatgtgaagatgtatacaatattt
atggtacaattacagactattatccctcatggtacaaatttcgcagaagcatacaccaat
ggttctagtgaagagcaggctttcattcaaaatcttgcgctcttttttgcttcatttttc
aagtctcacatccgagtactggaatcagctcctgcaaatagaggtggactattgatgggt
ctcgagtatcttattggtatttcatatgttgatgacactgaagtttttaaggtttgcttg
gactattggaatttactagttctagagctgtttgaagcgcatcacaacttggagaaccct
gctcttactgcaagcttaatgcgtcttcagcctacactcatgccagaggtggttgatggc
cttccttctcctcttgttcagaggcggcaactttattcagttccactgtccaagttaaga
acactcatgatttgtcgtatggctaagccagaagaggttttgattgctgaagatgaaaat
ggcaacatagttcgtgaaactatgaaagacattgatgtccttgttcagtataagataatg
cgagaaacattaatatacttgtctcaccttgatcatgaggacacagagcaacagatgttg
aagaagttgaacaagcaattgagtggagatgagtggtcgtggaacaacttaaacacatta
tgctgggccattggatcaatatcaggatcaatgatggaagagcaagaaaacagatttcta
gtaatggtcattcgtgatttattgaatctttgtgaaattacaaaaggaaaagataacaag
gctgtgattgcgagtaatataatgtatgttgtaggacagtatccacggtttctccgagcc
cattggaagtttctcaaaacagtagtgaacaagttatttgagtttatgcatgaaacacat
ccaggtgttcaggacatggcttgtgatacttttctgaaaattgtccagaaatgcaagcgc
aaatttgtgaccacccaggtgggtgaaaatgaaccatttgtttctgaacttttatctagt
ttatcaattactgtttcagatcttcagcctcatcaggttcactctttctatgagtctgtt
ggtcaaatgattcaagcagaacctcttcctgccaagagggacgagtatctgagaaggtta
atggatcttccaaatcagaaatgggctgaaatcattgggcaagctagccacagtgtagat
ttcctgaaagatcaagatgtaattaggacagttcttaacattttgcagacaaatactagt
gctgctagttctcttggaacatatttcttcccacaaatttctctcatatttttggatatg
cttacagtctacagaatgtacagtgaattaatatctaacagtattgttgaaggtggccct
tttgcttcaaaaacatcttttgttaagcttttgcgatctgtaaaacgggagacactcaag
ctgattgagacatttatagacaaagctgaagatcaaccccacattggcaagcagtttgtg
ccacctatgatggatcctgtccttggtgactatgccagaaacttgccagatgctagggaa
tctgaagtattatcactctttgcaaccattataaacaagtataaaattgtgatgatggag
tatgtaccccgcatatttgaagctgtattccagtgcactcttgagatgatcaccaagaat
tttgaggactatccagagcatcgtcttaagttcttctctttgttatgtgcgatcggtacc
cattgttttcaagctttaattcaactatcaagtcagcaattgaaactcgtgatggattca
atcatttgggcttttcgccataccgagaggaatattgctgagactggccttaatcttctg
ttggagttactgaaaaactttcaggtttcagagttctgtaaccaattctatagaacatat
tttttgacaatcgagcaggagatctttgctgtcttgacagatacattccacaaaccaggc
ttcaagctacatgttttagtgcttcaacatttgttttgcttggttgactctggcacgtta
accgagccactatgggattcttctacagttccatatccatacccaaacaatacaatgttt
tttcgagattacaccataaaactactgggatcatcatttccaaatatgtcagttgctgag
ataactacttttgttggtggattatttgagtcaaaaaatgatcctccaaacttcaagaat
catattcgagactttctcgtccaatcaaaagaattctctgctcaggataacaaagatctt
tatgcagaggaggctgcagtactgagagaacaggaacgccggagaatgttgtccattcct
gggctcattgccccaaacgagcgtcaggacgagatgttggattcatag
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integrated database retrieval system
