Zingiber officinale (ginger): 121980281
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Entry
121980281 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase UPL7-like isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121980281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121980281
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121980281
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
HECT type E3
121980281
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
121980281
NCBI-ProteinID:
XP_042388192
LinkDB
All DBs
Position
5A:19427217..19457795
Genome browser
AA seq
1156 aa
AA seq
DB search
MSAPAKQRQVSLRGASAKEISRDALLEKLAHDRELRSYQRRASAAALFIQRVWRRYIVIK
KVSEQLREEWEALADCYEDHMSGAWISNNLLRPFLFFVTHSPILWRCQIRNVKCITKCFG
ILLQSISSTDTQKNFCLLTVGTPQEKSAWLHQTQRLVSLCLFILADCSNSSHPDEMVTVA
ALSMRLLVSLTDVKGWKNFRTRDINDADLAVKRLIRYMTTNTNGIYSCFRKYILRNAPQS
SSWRNTVSSLENNLLITASAITLCLRPFHSMMLNDRDTGRIDVYEASKKYCIYVMTVPYL
TRYLPSILLPALKHEHVLLPCFSVLLTSEDKLFDEMLMLDQSDFATKEIPPLGWALANIV
NLAIEDDDSGSYGCFIQGLDCKLYTHAVNRILEKFVPWLESNQHSLKWDVDEMLMTSDCI
PISANSDKCSDIMFYFDLLKPVHQQWHLRKLLSLAKDSYGAPNGHLIKQTSDNQGSFKLQ
DVIYFYYYFLRIFSILNPANGALSILNVLSFTPGFIAEFWEAFECAIFGATVHMSHAVKQ
NKETILDQTEANSVTRQSRSMKESGHRWATVIQKISRRSNDESTASPRDIPQIPVESAAD
SYDSWDIEAMKHGAQGISKYLSCALFLFCSTYAHYLLVLDDIEFYEKQVPFTLQQQRKIA
ASLNTFVYNSLVHCANNYRSVIDIAVKCLNLLYERDCRHKFCPSCLWLAPARKGWIPVAA
AARAHEAAFSNLQAVDVSTIPAVSSILTTVPHLYPFEERVQMFRELIKLDKVSRRMTGEV
SEPGSSSIGIVVRRDHIIEDGYKQLNFLGPKLKSCINVSFISESGLPEAGLDYGGLSKEF
LTDLSKAAFDPEFNLFSQTSTADSTLIPSMAARLLENGMELIEFLGRVVGKALYEGILLE
YSFSLVFVQKLLGRYSFLDELSTLDSELYRNLMYVKHYEGDVTDLSLDFSVTEEICGKMI
VTELKPGGRNISVRNENKLHYVHAMADYKLNRQILPFSNAFYRGMIDLISPSWLCLFNAN
EFNQLLSGGKNDFDVDDLRSNTKYSGGYSETSRTVKLFWEVVKGFKSDERCMLLKFVTSC
SRAPLLGFKHLQPTFTIHKVACDIPLWATLGGQDVERLPSASTCYNTLKLPTYKRSSTLR
NKLLYAISSNTGFELS
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgccagcgaaacaacgacaggtctcgctgaggggtgctagcgctaaggagatc
tcacgggatgctcttctcgagaagcttgcccatgatagagagctccgcagctaccagcgc
cgtgcctcggccgccgccctcttcatccagagagtatggaggaggtatattgtcatcaaa
aaggtctcagaacaacttcgagaagaatgggaagcattagctgattgctatgaggatcac
atgagcggtgcatggatctcaaataatttattaaggccatttcttttctttgttactcac
tcaccaattttgtggaggtgtcaaattagaaatgtgaaatgtatcacaaaatgttttgga
attctcttacaaagtattagctcaactgatacacaaaaaaacttttgcttattaacagtg
ggtacgcctcaggagaaatctgcatggctacaccaaacacaacgattagtttcattgtgt
ttatttatccttgccgactgttctaactctagtcatccggatgagatggttacagttgct
gctctatcaatgcggttacttgtttctttgactgatgtaaaagggtggaagaattttaga
accagagatatcaatgatgcagatcttgctgtgaagagattaattagatatatgacaaca
aatactaatggcatatatagctgttttaggaagtacattttaagaaatgctccacaatct
tcatcctggaggaacacagtctcatcattggaaaataatcttctgatcactgctagcgcc
ataacattatgtctgcgcccatttcattcgatgatgttaaatgatagggatactggtagg
attgatgtgtatgaagcatctaaaaagtactgtatttatgtaatgacagtgccatatctg
actagatacctaccaagtattctgttacctgctcttaagcatgagcatgtactactacca
tgtttctctgtcttactgacttccgaagataaactttttgatgaaatgctgatgttggac
cagtccgattttgctacaaaagaaattcctcctttgggctgggctcttgcaaacatcgta
aatttggcaattgaggatgacgattctggttcttatggctgctttatccaaggcttagat
tgtaaactttatactcatgctgttaatagaattttggagaagtttgttccctggctggag
agtaaccaacactcattgaaatgggatgtcgatgagatgctcatgacaagtgattgtatt
cccatatctgcgaattccgataaatgttctgatattatgttctattttgatcttcttaaa
cctgtgcatcagcagtggcatctgaggaagcttctctccttggcaaaagattcatatgga
gcacccaatggtcatctcataaagcagacctcagacaatcaaggaagtttcaagctacaa
gatgtcatatacttctactattattttcttcggatattttctattttaaatccagctaat
ggcgcattatctattcttaatgtactttcttttacccctggattcattgcggaattttgg
gaagcatttgaatgtgccatctttggtgcaactgttcacatgtctcatgcagtcaaacag
aacaaagagaccattttggatcagactgaagcaaactctgttacaaggcaaagccgaagc
atgaaggagagtggacatagatgggctactgtgatacaaaagatttctagaaggtcaaat
gatgagtcaactgccagtcctagggacattcctcaaattcctgttgaaagtgctgcggat
agttatgactcgtgggatattgaagctatgaaacatggtgcccaaggcatttccaagtat
ttgtcatgtgctttgtttctcttctgttctacttatgcacactatttgttggttttagat
gatatagagttctatgaaaagcaggtacctttcacacttcagcagcaacgaaaaattgcg
gcttcacttaatacatttgtatacaattctttggttcattgtgcaaataattacagatcc
gtaatagacatagcagtcaaatgccttaatttgttgtatgaaagggactgcaggcacaag
ttttgtccctcttgtctatggttagctcctgctagaaaaggttggattccagttgcagca
gctgctagagctcatgaagctgcattttcaaatctgcaagctgtagatgtttccaccatt
ccagcagtgagctctattctaacaactgtaccacatctgtatccttttgaggaaagagtt
caaatgtttagggaacttattaagctcgacaaggtttccagaagaatgaccggtgaagta
tctgagccagggtctagttcaattggtatagttgttcgtcgagatcatataattgaagat
ggatacaagcaattgaattttcttgggccaaagttgaagtcatgcattaatgtgtcattt
attagtgaaagtggtcttcctgaggctggtcttgactatggtggtttatcaaaagagttt
ttaactgatttatccaaggctgcttttgatccagagttcaatctattttcacagacatca
actgcagatagcactttaattcctagtatggctgcaagattgttagagaatggcatggag
ttgattgaattccttggaagggttgttgggaaagctctttatgaaggcattttattagaa
tatagcttttcactggtatttgtgcagaagctcttaggacgttatagttttcttgatgaa
ctctcaacactagattctgagctatataggaatctcatgtatgtgaagcattatgaaggt
gatgtcaccgatctatctttagatttcagtgttactgaagagatatgtgggaaaatgatt
gtcacagagcttaaacctggtggtaggaatatctctgtaagaaatgagaacaagttacac
tatgttcatgcaatggctgactacaaactgaatcgccaaatacttccattttctaatgca
ttttatagaggcatgattgatctgatctccccatcttggttatgcttatttaatgcgaat
gaatttaaccagctgctttcaggtggtaaaaatgactttgatgtcgatgatcttcgaagc
aatacaaagtactccggtggttattctgaaacaagtagaactgttaagctcttctgggag
gttgtgaaaggattcaaatcagatgagagatgtatgctactgaagtttgtgacaagctgt
tctcgtgctccattacttggattcaaacacctacagcctacctttacaattcacaaggtt
gcctgtgatatacctctatgggctacactaggcggacaagatgtagaacgacttccctcc
gcttccacctgctacaatacactaaagcttccaacatataaacggtcaagtactttaagg
aacaagctactttatgccatcagttcaaacaccggatttgaactttcttga
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