Zingiber officinale (ginger): 121980284
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Entry
121980284 CDS
T08725
Name
(RefSeq) auxin response factor 7-like
KO
K14486
auxin response factor
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121980284
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
UPF1_1B_dom
Motif
Other DBs
NCBI-GeneID:
121980284
NCBI-ProteinID:
XP_042388198
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Position
5A:20311324..20319182
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AA seq
676 aa
AA seq
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MAVVDANRSSGFGISGDMLYKELWHACAGPLVTLPRQGERVYYFPQGHMEQLEASTNQGL
EQHVPVFNLPSKILCKVVNVVLQAEKDTDEVFAQITLLPESNAGEVTSPDPPLPEPESCK
VHSFCKTLTASDTSTHGGFSVLRKHADECLPPLDMSLEPPWQELVAKDLHGNEWRFRHIF
RGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENKELCVGVRRLMRHLNNMPSSVISSH
SMHLGVLATASHAITTGTLFSVFYKPRASRSEFIISLNKYLEAKNHKLTVGMRFKMRFEG
DEAPERRVSGTIVGVTEKASSQWEDSEWRSLKVQWDEPSSAILPDKVSPWELEPLVVPTP
PTSQPIQRIKRARPPSSPVISPDLSSVSGAWQSPSKMFSFSASQRVPELYTPSKPLSVLS
SASNACSIGFATKYSPLPVADSQMGWPTTPETPKEALSASVNKESCDKKHETSKGCRLFG
IQLIEGCRGIEETPSIPTIRGIEVDQPVKSLEVDSESQSQPSNVNRSDTAGEAEKSSLRS
SWETQNQQLRSCTKVHMHGKAVGRAVDLTRLCGYDELLQKLEDLFNIKGELTNVPKKWVV
FYTDDEDDMMMVGDDPWLEFRRMVKKIYIYTNEEAKRLSPKRKLPVLVAAKPGSLRDIDM
DANGNNLEGDDNGDVA
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggtggatgcaaatagatcatcaggcttcgggatttctggtgatatgttatac
aaggaattatggcatgcatgtgctggccccttggttaccttacctcgtcaaggggagcgt
gtttattactttcctcaaggtcatatggaacagctggaggcatcaacaaaccaagggcta
gagcagcatgtgcctgtgttcaatctaccctcaaagatcctgtgtaaggtggtcaatgtt
gttcttcaagctgaaaaagatacagatgaagtctttgcacagattaccctgttgcctgag
tcaaatgctggtgaggtcacttccccagatcctcctctacctgagcctgaaagctgcaaa
gttcactccttctgtaagacattaactgcctctgacacaagcacccatggaggtttctca
gttcttagaaagcatgcagatgaatgccttcctccactggatatgtctctggaaccacct
tggcaagagctagttgccaaagatcttcatggaaatgagtggcgatttcgtcacatcttt
cgaggtcagcctagacggcacttgcttacaacaggttggagtgtatttgtcagctcaaag
cgtttggtagctggtgatgcttttatatttttaagaggggaaaataaggaactgtgtgta
ggtgtcagaaggctcatgcgacatctaaacaacatgccatcatctgtcatttccagtcat
agcatgcatcttggagttcttgctactgcatcccatgctattactactggaactcttttt
tctgtattttacaagccaagagcaagccgttctgaatttattataagcctgaacaagtat
cttgaggctaagaatcacaagttgactgttgggatgagattcaagatgagatttgaaggt
gatgaggctccagaaagaagagttagtggaactattgttggtgtaactgagaaagcatct
tctcaatgggaagattcagaatggagatcattaaaggtccaatgggatgaaccttcatct
gctatacttccagataaagtttctccttgggaattggagccacttgtagtgcctactccc
ccaacatcccaaccaatccaaagaataaagcgagcacgaccaccatcttcacctgttatc
tcccctgacctttcttcagtgtctggtgcttggcaatccccatctaaaatgttctctttc
tctgcatcgcaaagggttcctgagctctatacaccatctaaaccactttctgtgctctca
tcagcatccaatgcttgttctattggatttgcaacaaaatattctcctttgcctgttgct
gacagccaaatgggctggccaaccactccagaaaccccaaaagaagccttatcagcaagc
gtcaacaaagaatcatgcgataaaaaacatgaaacaagcaaaggctgcaggttatttggt
attcagctaattgaaggttgtcgtggaatagaggaaacaccatccattcctacgattaga
ggaattgaggtggaccaaccagtgaaatctttggaagtggattcagagtcacaatcacag
ccatcaaatgtcaacagatcagatactgccggtgaggcagaaaaatccagtttgaggtca
tcttgggagacacaaaaccagcaactgaggagctgcaccaaggttcacatgcacggaaag
gcagttgggagggcagtggacttgaccagattatgtgggtacgatgagcttctgcagaag
ctggaagatttgtttaatatcaaaggagagcttactaatgtacccaaaaagtgggtggtc
ttctacacagatgatgaggatgacatgatgatggtcggcgatgacccttggcttgagttc
cgcaggatggtgaagaagatatacatctacacgaatgaagaggccaagcgactctctcct
aagaggaaactcccagtgcttgtagctgcaaagcctggttccttgcgtgacattgacatg
gatgccaatggtaacaaccttgaaggtgatgacaatggcgacgttgcttag
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