Zingiber officinale (ginger): 121980503
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Entry
121980503 CDS
T08725
Name
(RefSeq) transcription initiation factor IIE subunit beta-like
KO
K03137
transcription initiation factor TFIIE subunit beta
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121980503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
121980503
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
121980503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFA2_Winged_2
TFIIE_beta
Motif
Other DBs
NCBI-GeneID:
121980503
NCBI-ProteinID:
XP_042388505
LinkDB
All DBs
Position
5A:59174019..59179086
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AA seq
280 aa
AA seq
DB search
MSLQESLNRFKQQQERCQSTLTAISSRPSSKTSKSHKAAPSSNSSAPSKVSAPIKFSNDT
ERLQHINAIRKSPVGAQLKRVIDLLFETRQSFTPEEINEACYVDVNSNKALFDSLKNNTK
VNYNGKRFSYKSKHDLKGKDQLLSLIRKYAEGLPVVEVKDSYSSVLEDLQALKASGQVWL
LSNMDSQEDIVYPNDPKVIIKVDDELKQLFRGIELPRDMVDIEKELHKNGMKPATNTAKR
RAMAEVHGITSKPKPKKKREITRRTKLTNAHLPELFQHLN
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgcaagaaagccttaataggtttaagcaacaacaggagaggtgtcagtcaact
ctcacagctatatcgtctcgtccatcttcaaagacttctaaatcacacaaagcagcacct
agtagcaattcatcagctccttcaaaagtatctgcacccattaaattctcaaatgataca
gaaaggctgcagcacatcaatgcgattagaaagtctcctgttggtgcacaacttaaacgt
gttattgacttactctttgagactagacaatcttttacaccagaagagataaatgaagca
tgctatgtcgatgtaaattccaataaggcgctctttgatagcttaaagaataacacaaaa
gtaaattataatgggaagcgcttctcttacaagtccaagcatgatctgaaagggaaggac
caacttctttcactgataaggaaatatgcagagggactcccagttgtggaggtcaaagat
tcatattcatctgttctggaagacttgcaggctctaaaggcatctggtcaagtctggtta
ttgtccaacatggattctcaggaagacattgtttaccccaatgatccaaaggtaatcata
aaggtggatgatgaattaaagcagcttttccgggggatagagttgccaagggacatggtt
gacatcgaaaaggagcttcacaagaatggcatgaagccagctaccaacactgccaagagg
cgggccatggcagaagttcacggcatcacttccaagcctaagccaaagaaaaagcgcgag
attacacgccgtaccaagttgacgaatgcccatctcccggagctcttccagcacttgaat
tag
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