Zingiber officinale (ginger): 121980596
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Entry
121980596 CDS
T08725
Name
(RefSeq) partner of Y14 and mago-like
KO
K14294
partner of Y14 and mago
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121980596
03015 mRNA surveillance pathway
121980596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121980596
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121980596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
Motif
Other DBs
NCBI-GeneID:
121980596
NCBI-ProteinID:
XP_042388636
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Position
1B:134915687..134920791
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AA seq
225 aa
AA seq
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MASSGRDPPPPRLLSIPKEGERILAPTRRPDGTLRKPVRIRAGYVPQDEVAPYQPKGAIL
RKESEPEVPPGYDPALVEKLKSKAAKRNERKKEKRHQAALEKEKKMVSEETQILRTEEVA
TADSTAQREESLDIVTEQISRMSVFAKPEAPSSSADPAEALKPECSGLDLDKKIRAVKKK
IRLAEAQLVDNQQSMKPEHMEKMRKVEGWREELKLLEDRKASSVS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctccggtcgtgacccccctccgcctcgcctcctctccatccccaaggagggc
gagcggatcctcgctcccacgaggaggcccgacggcaccctccgtaagcccgtccgcatc
cgcgccggatacgtaccccaggacgaggtcgccccctaccagccaaagggagcaattttg
aggaaagagagtgaacctgaagtgcctccagggtacgatcctgcgttggtcgagaagctg
aagagcaaagcagcaaagaggaacgagaggaagaaggagaagcggcaccaggctgcactt
gagaaggaaaagaaaatggtttcagaggaaactcagatattgagaactgaagaagttgct
acggctgatagtactgctcaaagagaggaatctttggacatagtcacagagcagataagt
aggatgtctgtctttgcaaaacccgaggcaccaagctcttctgcagatccagcggaagct
ctaaaacctgagtgttctggcctggatttagataagaaaattcgagcagttaagaaaaag
attcgtctagcagaagctcagttagttgataaccagcaaagtatgaaacctgagcacatg
gagaagatgcgaaaagttgaaggatggcgcgaggaactaaaactcttggaggacagaaag
gctagttcagtttcataa
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