Zingiber officinale (ginger): 121980672
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Entry
121980672 CDS
T08725
Name
(RefSeq) DNA repair protein RAD51 homolog 1
KO
K04482
DNA repair protein RAD51
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03440
Homologous recombination
zof03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121980672
03460 Fanconi anemia pathway
121980672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121980672
04121 Ubiquitin system [BR:
zof04121
]
121980672
03400 DNA repair and recombination proteins [BR:
zof03400
]
121980672
Membrane trafficking [BR:
zof04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121980672
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
121980672
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
121980672
RecA family proteins
121980672
FA (Fanconi anemia) pathway
Other FA pathway factors
121980672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
HHH_5
ATPase
AAA_22
DnaB_C
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
121980672
NCBI-ProteinID:
XP_042388748
LinkDB
All DBs
Position
5A:complement(78088180..78091936)
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AA seq
342 aa
AA seq
DB search
MAAAAQKQQRVAEEQEKEDEMQHGPFPIEHLQASGIAAVDVKKLKDAGLCTVESVAYTPR
KDLLQIKGISDAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQITSGSRELDKILEGGI
ETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIADR
FGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVEARFALMIVDSATALYRTDFSGRGE
LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATT
TRLALRKGRAEERICKVISSPCLAEAEARFQISAEGVADVKD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagcgcagaagcagcagagggtggcggaggagcaggaaaaggaagatgag
atgcaacatggtccttttcccatagagcatcttcaggcatctgggattgctgccgtagat
gtcaagaagttaaaagatgctggactttgtactgtggaatctgttgcatatactccaagg
aaagatctgctgcaaatcaaagggattagtgatgcaaaagttgacaaaataattgaagca
gcttctaagttggtacctcttggatttactagtgcaagtcaactccatgctcaacgtctt
gaaataattcagatcacatctgggtcaagggaacttgataagatcttggaaggaggaatt
gaaactggatctattactgaactatatggggagtttcgttctggtaaaacacaattgtgc
cacactctctgtgtcacctgtcagcttccattagatcaaggtggtggtgaaggaaaggca
ttatatattgatgctgagggcacatttaggcctcaaagactacttcagattgcagataga
tttggattgaacggtgctgatgttttagaaaatgtagcttatgctagagcatacaatact
gatcatcagtcaaggttattgctggaagcagcttcaatgatggtggaagcaaggtttgct
cttatgatagtggacagtgcaacagccctttacagaacagatttttctggaagaggtgaa
ctgtcagccaggcaaatgcatctcgcaaagttcctaaggagccttcagaaattggccgat
gaattcggggtggctgtggtcattactaatcaagtcgttgcacaagtcgatggatctgca
atttttgccggtccacaaatcaagcctattggtggaaacatcatggcgcatgccaccaca
acaaggcttgccttgcgcaagggaagggcagaagaacgcatttgtaaagtgataagctct
ccatgtttagctgaagcagaagcaaggttccagatatctgcagaaggtgtcgccgatgta
aaagattga
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