Zingiber officinale (ginger): 121980679
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Entry
121980679 CDS
T08725
Name
(RefSeq) polyubiquitin isoform X1
KO
K08770
ubiquitin C
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121980679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121980679
Ubiquitin system [BR:
zof04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
121980679
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
Dsc3_N
DUF2604
Ubiquitin_5
Plexin_RBD
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
121980679
NCBI-ProteinID:
XP_042388761
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Position
5A:complement(78561820..78563853)
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AA seq
337 aa
AA seq
DB search
MGSVALNCIHPQFTVAYCSSKSFSRFASSSIKMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGQ
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgggctcggttgcgttaaattgcatccatccccaatttacggtcgcgtactgctcgtcc
aaaagcttctccaggttcgcttcctcttcgatcaagatgcagatctttgttaaaaccctt
actggcaagactatcaccctcgaggtggagtcctcagacactatcgataacgttaaggcc
aagatccaagacaaggaggggatccctcccgaccagcaaaggctgatctttgctggtaag
caactcgaggacggtcgcaccctcgcggactacaacattcagaaagagtctaccctccac
ctcgttctccgccttcggggtggcatgcagatctttgtcaagacgttaactggcaagaca
atcaccctggaggttgaatcctcggatactatcgacaacgtcaaggccaagatccaggac
aaggagggcatcccgccggaccagcaaaggttgatctttgcaggcaagcagctcgaggac
ggccgcaccttggccgattataacatccagaaggaatctaccctccaccttgtgcttcgt
ctccgcggtggcatgcagatcttcgtcaaaaccttgactggcaagacgatcaccctcgag
gtggagagctctgacaccattgacaacgtcaaggccaagatccaggacaaggagggcatc
ccaccggaccagcaaaggttgatttttgcaggtaagcaacttgaggacggccgcaccctg
gccgattacaatatccaaaaggaatccaccctccacctcgtccttcgtctccgtggcgga
atgcaaatcttcgtcaagactctcacgggcaagacgatcaccctggaagtggagagctca
gacacgatcgacaatgttaaggctaaaatccaggacaaggaggggattccaccggatcag
cagaggctcatcttcgccggcaagcagctggaggacggccgcaccttggccgattacaac
attcaaaaggagtccactctccacctggtcctccgtctccgtggtggccagtga
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