KEGG   Zingiber officinale (ginger): 121980679
Entry
121980679         CDS       T08725                                 
Name
(RefSeq) polyubiquitin isoform X1
  KO
K08770  ubiquitin B/C
Organism
zof  Zingiber officinale (ginger)
Pathway
zof04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121980679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zof04121]
    121980679
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zof04147]
    121980679
Ubiquitin system [BR:zof04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   121980679
Exosome [BR:zof04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   121980679
  Exosomal proteins of other body fluids (saliva and urine)
   121980679
  Exosomal proteins of colorectal cancer cells
   121980679
  Exosomal proteins of bladder cancer cells
   121980679
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 TBK1_ULD Rad60-SLD_2 Dsc3_N DUF2604 Ubiquitin_5 Plexin_RBD UBL_UBAC1 UBL
Other DBs
NCBI-GeneID: 121980679
NCBI-ProteinID: XP_042388761
LinkDB
Position
5A:complement(78561820..78563853)
AA seq 337 aa
MGSVALNCIHPQFTVAYCSSKSFSRFASSSIKMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGQ
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgggctcggttgcgttaaattgcatccatccccaatttacggtcgcgtactgctcgtcc
aaaagcttctccaggttcgcttcctcttcgatcaagatgcagatctttgttaaaaccctt
actggcaagactatcaccctcgaggtggagtcctcagacactatcgataacgttaaggcc
aagatccaagacaaggaggggatccctcccgaccagcaaaggctgatctttgctggtaag
caactcgaggacggtcgcaccctcgcggactacaacattcagaaagagtctaccctccac
ctcgttctccgccttcggggtggcatgcagatctttgtcaagacgttaactggcaagaca
atcaccctggaggttgaatcctcggatactatcgacaacgtcaaggccaagatccaggac
aaggagggcatcccgccggaccagcaaaggttgatctttgcaggcaagcagctcgaggac
ggccgcaccttggccgattataacatccagaaggaatctaccctccaccttgtgcttcgt
ctccgcggtggcatgcagatcttcgtcaaaaccttgactggcaagacgatcaccctcgag
gtggagagctctgacaccattgacaacgtcaaggccaagatccaggacaaggagggcatc
ccaccggaccagcaaaggttgatttttgcaggtaagcaacttgaggacggccgcaccctg
gccgattacaatatccaaaaggaatccaccctccacctcgtccttcgtctccgtggcgga
atgcaaatcttcgtcaagactctcacgggcaagacgatcaccctggaagtggagagctca
gacacgatcgacaatgttaaggctaaaatccaggacaaggaggggattccaccggatcag
cagaggctcatcttcgccggcaagcagctggaggacggccgcaccttggccgattacaac
attcaaaaggagtccactctccacctggtcctccgtctccgtggtggccagtga

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