Zingiber officinale (ginger): 121980722
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Entry
121980722 CDS
T08725
Name
(RefSeq) ras-related protein RABF1-like
KO
K07887
Ras-related protein Rab-5A
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
zof04145
Phagosome
zof04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121980722
04145 Phagosome
121980722
04148 Efferocytosis
121980722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121980722
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121980722
04031 GTP-binding proteins [BR:
zof04031
]
121980722
Membrane trafficking [BR:
zof04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
121980722
Endosome - Lysosome transport
121980722
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121980722
Exosomal proteins of other body fluids (saliva and urine)
121980722
Exosomal proteins of colorectal cancer cells
121980722
Exosomal proteins of bladder cancer cells
121980722
GTP-binding proteins [BR:
zof04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
121980722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
RsgA_GTPase
GTP_EFTU
MMR_HSR1
AAA_7
TniB
AAA_16
AAA_29
Motif
Other DBs
NCBI-GeneID:
121980722
NCBI-ProteinID:
XP_042388832
LinkDB
All DBs
Position
5A:complement(80611943..80616958)
Genome browser
AA seq
198 aa
AA seq
DB search
MGCSSSLPGRNARNLGGLDAENSMATDPKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTIGASFLSQTLALQDSTTVKFEIWDTAGQERYASLAPLYYRGAAVAVVVYDITSEET
FRKAQYWVKELQKHASPGIVMALVGNKADLDENRTVSSGDAMEYAEGNGMFFIETSAKTA
NNINELFQEIAKRLPRTS
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggggtgctcctcctctcttccaggccgaaatgccagaaatttgggtggtttggatgct
gaaaattccatggccactgacccaaaaaacttgcgtgtgaagttggttctgttaggtgat
tctggtgtgggtaaaagctgcatagtcctccggttcgttcgtggccaatttgaccctact
tcaaaggttaccatcggtgcatccttcttatcacaaacactagccttgcaagattccaca
acagtgaagtttgaaatatgggatacagctggacaagaaaggtatgcctcattggctcct
ctttactatcggggagctgctgttgcggttgtggtatatgacataacaagtgaagaaaca
tttagaaaagcacaatattgggttaaggaacttcagaagcatgccagtcctggtatcgtc
atggcattggttggtaataaggctgatttggatgaaaataggactgtctcatccggggat
gccatggagtatgcggaagggaatggtatgttcttcattgagacatctgcaaagacggct
aataatatcaatgaactttttcaggagatcgcaaagcgacttcctcggacatcttaa
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integrated database retrieval system