Zingiber officinale (ginger): 121980860
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Entry
121980860 CDS
T08725
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-2-like
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121980860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
121980860
Spliceosome [BR:
zof03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
121980860
Complex B
121980860
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
121980860
NCBI-ProteinID:
XP_042389046
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All DBs
Position
5A:87065777..87068158
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AA seq
204 aa
AA seq
DB search
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
AAAFQVGATFNQHLMTMPGARPPLPLLIPPMLPIGASPHASMNAPLQPGVRPPVLPPPFG
VPGYGAIPPVAAVPSAVGPPGAPTTTPMQPTNLPRPPTLPPPISGAMAMPTTNTTAPAIH
QGNPSSAPTTSFESFNAPSGSTAP
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtactactgcgattactgtgatacttacttgacccacgactctccatctgtg
agaaagcaacacaatgctggctataaacacaaggcaaatgtacgctcttactaccagcaa
tttgaggagcaacaaactcaaagtttaatcgaccagagaatcaaggaacatctcggtcag
gctgccgctttccaagttggtgccacttttaaccagcatctgatgaccatgccaggggcc
cgaccccctcttccacttttaatacctcctatgttgcctattggagcatctcctcatgct
tctatgaacgcaccacttcaaccgggggttagaccccctgttttgccacctccatttggt
gtaccaggttatggagctattcctccagtggccgctgtcccctctgcagtaggaccacct
ggtgcaccaacaacgacaccaatgcaaccaactaatcttcctaggccacctacattgcca
cctccaatttcaggggccatggcaatgccaactaccaacactactgcacctgctatccat
cagggcaacccatcatcagctccaacaaccagctttgaatcttttaacgctccttctgga
tccactgctccataa
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