KEGG   Zingiber officinale (ginger): 121980891
Entry
121980891         CDS       T08725                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03013  Nucleocytoplasmic transport
zof03015  mRNA surveillance pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121980891
  09122 Translation
   03013 Nucleocytoplasmic transport
    121980891
   03015 mRNA surveillance pathway
    121980891
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    121980891
   03041 Spliceosome [BR:zof03041]
    121980891
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     121980891
Spliceosome [BR:zof03041]
 Complex C
  Other components
   EJC/TREX
    121980891
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 121980891
NCBI-ProteinID: XP_042389091
LinkDB
Position
5A:complement(88323701..88328918)
AA seq 158 aa
MAATGGSGGGDQDEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEV
FVSPAVLRECRRIIADSEIMKEDDNNWPPPDRVGRQELEIVMNNEHISFTTSKIGSLVDV
QGSQDPEGLRVFYYLVQDLKCFVFSLISLHFKIKPIQS
NT seq 477 nt   +upstreamnt  +downstreamnt
atggcggcgacgggaggatccggtggaggcgatcaggatgagttctacctccggtactac
gtgggtcacaaggggaagtttggtcacgagtttctggagttcgagtttcgccccgacggc
aagcttcgctacgccaacaactccaactacaagaacgacaccatgatccgcaaggaggtc
ttcgtctcccccgccgtactccgcgagtgccgacgcatcatcgctgacagcgagattatg
aaggaggatgataacaactggccgcccccggaccgtgttggcaggcaggagctggagatc
gtgatgaacaacgagcacatatcgttcactacttccaagattggatcccttgttgacgtc
cagggcagtcaggaccctgaagggctccgtgttttctattatctcgtccaggatctgaag
tgcttcgttttttctttgatttctctgcacttcaagattaaacccattcagtcttga

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