Zingiber officinale (ginger): 121980891
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Entry
121980891 CDS
T08725
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
zof03015
mRNA surveillance pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121980891
09122 Translation
03013 Nucleocytoplasmic transport
121980891
03015 mRNA surveillance pathway
121980891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121980891
03041 Spliceosome [BR:
zof03041
]
121980891
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121980891
Spliceosome [BR:
zof03041
]
Complex C
Other components
EJC/TREX
121980891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
121980891
NCBI-ProteinID:
XP_042389091
LinkDB
All DBs
Position
5A:complement(88323701..88328918)
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AA seq
158 aa
AA seq
DB search
MAATGGSGGGDQDEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEV
FVSPAVLRECRRIIADSEIMKEDDNNWPPPDRVGRQELEIVMNNEHISFTTSKIGSLVDV
QGSQDPEGLRVFYYLVQDLKCFVFSLISLHFKIKPIQS
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacgggaggatccggtggaggcgatcaggatgagttctacctccggtactac
gtgggtcacaaggggaagtttggtcacgagtttctggagttcgagtttcgccccgacggc
aagcttcgctacgccaacaactccaactacaagaacgacaccatgatccgcaaggaggtc
ttcgtctcccccgccgtactccgcgagtgccgacgcatcatcgctgacagcgagattatg
aaggaggatgataacaactggccgcccccggaccgtgttggcaggcaggagctggagatc
gtgatgaacaacgagcacatatcgttcactacttccaagattggatcccttgttgacgtc
cagggcagtcaggaccctgaagggctccgtgttttctattatctcgtccaggatctgaag
tgcttcgttttttctttgatttctctgcacttcaagattaaacccattcagtcttga
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