Zingiber officinale (ginger): 121980926
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Entry
121980926 CDS
T08725
Name
(RefSeq) general transcription factor IIF subunit 2-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121980926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
121980926
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
121980926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Tau95
UBR1-like_wing
Motif
Other DBs
NCBI-GeneID:
121980926
NCBI-ProteinID:
XP_042389140
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All DBs
Position
5A:complement(89468160..89473474)
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AA seq
257 aa
AA seq
DB search
MEDGRIPLETARAERSVWLMKCPPVVSRSWQSSAAGSSTSPNPVVAKVVLSLDPLHPDDP
SSLQFKMEMAQTDSANTPKSYTLNMFKDFVPMCVFSESNQGKFSLEGKVEHKFDMEPHSE
NFGDYGKLCRERTNKAMVKTRQVQVIDNDHGVLMRPMPGMVGLVPSGSKDKKKLTPSKGL
DAKRIRRDKQELVNILFKLFEKQPNWALKQLVQETDQPEQFLKEILNEICVYNKRGPNQG
THELKMEYKNFEGADNE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggaggacggcaggatcccgctggagactgcgagggcggagcgatcggtgtggctgatg
aagtgcccaccagtcgtgtcgaggtcgtggcaatcgtccgccgccggatcctccacctcc
cccaaccccgtcgttgctaaggtcgtcctctccctcgaccccctccatcctgacgatccc
tcctcactccagtttaagatggaaatggctcaaactgattctgctaatacacccaagagt
tacacgctgaatatgttcaaagattttgttccaatgtgtgttttttctgaatcaaaccaa
ggaaagttctcactagagggaaaggtagagcacaaatttgacatggaacctcacagtgaa
aattttggggattatggtaaattatgtcgtgaaaggacgaacaaagctatggtcaaaact
agacaagtccaggtaattgacaatgatcatggtgtgctaatgaggccaatgcctggtatg
gttggtctagttccatctggttcgaaggacaagaaaaaactaaccccgtccaaaggattg
gatgcaaaacggatacgcagggataaacaagaattggtgaacattctctttaaacttttt
gaaaagcaaccaaattgggcactgaagcaactggttcaagagactgaccaacctgagcaa
ttcctgaaagagatattaaatgagatttgtgtctacaacaagagaggacctaatcaagga
actcatgaactcaaaatggaatacaagaatttcgagggagccgacaatgaatga
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