Zingiber officinale (ginger): 121980935
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Entry
121980935 CDS
T08725
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2-like
KO
K11096
small nuclear ribonucleoprotein D2
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121980935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
121980935
03032 DNA replication proteins [BR:
zof03032
]
121980935
Spliceosome [BR:
zof03041
]
Complex A
U1 snRNP components
Sm proteins
121980935
U2 snRNP components
121980935
Complex B
U1 snRNP components
121980935
U4/U6.U5 tri-snRNP components
121980935
Complex C
U2 snRNP components
121980935
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
121980935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
121980935
NCBI-ProteinID:
XP_042389151
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All DBs
Position
5A:complement(89776190..89778960)
Genome browser
AA seq
104 aa
AA seq
DB search
MEDETNAKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENV
REMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaaactaatgccaagaaagaagaggaagaattcaatacaggacccctctct
gttctgatgatgagtgtcaagaataatactcaggtgcttattaattgcaggaacaacaag
aaactacttggtcgagtgagagcatttgatcgccactgcaacatggtcctagaaaatgtt
agggagatgtggaccgaggtacccaagacgggcaaggggaagaagaaagctcttccagtc
aacaaggatagattcatcagcaagatgttccttcgtggagactctgtcatcattgtgcta
cgtaaccccaaatga
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